Dehalococcoides mccartyi DCMB5: dcmb_404
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Entry
dcmb_404 CDS
T02476
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
dcmb_404 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmd03400
]
dcmb_404 (nfo)
Enzymes [BR:
dmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
dcmb_404 (nfo)
DNA repair and recombination proteins [BR:
dmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
dcmb_404 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGG06033
LinkDB
All DBs
Position
complement(413425..414384)
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AA seq
319 aa
AA seq
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MIPSVSSPKICFKYSIQPFEVCNTGKTGLRFFKYRTYLIYLTSMAGLLFGTAGIPYSTPK
HTTQNGIHRVAELGLDGMEIEFVRGVYMKAPDTNPVRILSDLLRIKLSAHAPYYLNFNAV
EENKVKMSQHLLYQSAKMAHLCGAGSLVFHPGFYLTDSPSAAYESIRDNIRPVASRLQEE
GFDITLRPEVSGKVTQFGDLKETMALCSEIPGLLPTIDFSHYHARTGKYNSYSEFSFMLS
TMADYLGENAVLNMHIHVSGIDYSPRGEKQHLNLADSDFNYKELLLALRDRGCAGLVICE
SPNIEEDALLLKETYFSLA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgattccaagtgtatcctccccaaaaatctgttttaagtatagcatacaaccctttgag
gtctgtaatacgggcaaaacaggcctgcggttttttaaataccggacatatctgatatac
ttaacctctatggcaggtttacttttcggcaccgccggcattccctactccacccccaaa
cacaccacccagaatggaattcacagggtggcggaactggggctggacggcatggaaata
gaatttgtccgcggggtatatatgaaagccccggataccaacccggtcagaatcctttcg
gatcttctgcgtataaaactgtctgcccatgccccgtactatctgaactttaatgcagtt
gaagaaaataaagtcaaaatgagccagcacctgctttaccagtctgccaaaatggctcac
ctctgcggggcagggtcactggtatttcaccccggtttttacctgacagactcgccttct
gctgcctacgaatccatacgggataatatccgccctgttgccagccgtcttcaggaagaa
ggctttgatataacccttcgacccgaggtaagcggtaaggtgacccagttcggagacctg
aaagagactatggcactgtgcagtgaaatacccggcctattgccgactatagatttttcc
cactatcatgcccgtaccggtaaatacaactcctattcagagttcagctttatgttaagt
accatggctgactatctgggtgaaaacgcagttctaaatatgcatatacacgtttcgggc
atagactactctcccagaggggaaaaacagcacctgaatctggctgattcagatttcaat
tacaaagaattgctgctggctctgagagacaggggctgtgcagggctggtaatatgtgaa
agccctaatatagaagaagatgccctgctcctgaaagagacctacttctctctggcctaa
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