Dehalococcoides mccartyi DCMB5: dcmb_55
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Entry
dcmb_55 CDS
T02476
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
dmd
Dehalococcoides mccartyi DCMB5
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dmd03110
]
dcmb_55 (clpC)
Chaperones and folding catalysts [BR:
dmd03110
]
Heat shock proteins
HSP100
dcmb_55 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_14
AAA_18
IstB_IS21
nSTAND3
ATPase_2
AAA_28
Roc
nSTAND1
NACHT
bpMoxR
NBD_SMAX1
Zeta_toxin
RuvB_N
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
AGG05689
LinkDB
All DBs
Position
51247..53721
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AA seq
824 aa
AA seq
DB search
MSNRFDKFSERARRVLTYAQEKAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLA
KVRSAVEFILGRGEHPATSETGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGE
GAAAGVLESFGVTVEKVRTEVGRILNQGLNKPKTSRTTPSRTPQLDQLGFDLTAAAKAGK
LDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKH
IISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAAN
ILKPSLARGEVQVIGATTLDDFRKYVERDAALERRFQPVLVEEPAIEDTLSILRGIKERY
EEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDLVDEAASRVRIKKRTKPVSLKEMKA
IEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMEDEWQTEQAMDKPVVGEEDIAQ
VVSMWTGVPLVQLTGDETERLLHMEDALHERIIGQEEAIVTISKAVRRARAGLKDPRHPI
GNFVFLGPTGVGKTELARALAQFMFGSEDSLVRLDMSEFMEKFAVSRLVGAPPGYVGYDE
GGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGHLTDAKGRRVDFRNTIIIMTS
NIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFH
SLNKEQIRSIVDLMLKSVVKQMAEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTM
IEDRLSEDLLRAKFKAGDKVIVDTAEDEIIVRLAEPAELSQATP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacagatttgataaattttccgaaagagcgcgccgggttcttacctatgcacag
gaaaaagcccagagccttaaccataactacatcggcactgagcatatactgctggggctg
gtgagagaagaagaaggcgtggccgcccgggtgctggtgaatatggacgtaaacctggcc
aaggtacgttcggctgttgaatttatactgggacggggtgaacaccctgctacctctgaa
accggccttacctccagagccaaaaaggtaatagagctgggtattgatgaagccagaaat
ctgggccataactacattggcactgagcatttgcttttaggccttctgcgtgaaggtgaa
ggggcggctgccggtgtgcttgagagttttggggttacagttgaaaaggtgcgcaccgaa
gtagggcgtatcttgaatcagggtttaaacaaacctaaaaccagccggacaacccccagc
cgaaccccccagctggaccagttaggttttgacctgacggccgcagccaaggctggtaag
cttgacccggttatcgggcgttccaaagaaatagaacgggtagtccagattctttcccgc
cgtaccaaaaataaccctgctcttataggcgaacctggcgtaggaaaaacctccattgtg
gaggggctggcccagcgcattgtttcgggtgacgtaccggaaactctggaacagaagcat
ataatctcactggacgtggcctcactggtggccggtaccaaataccggggtgaatttgag
gaacggcttaagaaggttattgaagagattaaaaatgcaggaaacataatcctgtttata
gacgaattccacaccatggtgggagccggtgctgccgagggggcagtagatgccgccaat
atcctcaagccttcactggccagaggtgaggtgcaggttatcggtgcgaccactctggat
gatttccgtaagtatgttgagcgtgatgccgcacttgagagacgcttccagccggtactg
gttgaagaaccggccatagaagatacactgagcattctcaggggtataaaagaacgctat
gaggagcatcataagcttatcatcagcgatgaagctattatcgctgctgccaatatggct
gccagatatatacctgaccgctttttgccggacaaggctatagatttggttgacgaagct
gcatcacgggtgcggataaagaaacgcaccaagccggtctctttgaaagagatgaaagct
atagaagacagctaccgccgggataaagaagccgctctggctacccagcagtacgactat
gcttccgaactccgcgagcgtgagcttcagatagctgaaaagatacgccgcatggaagat
gaatggcagaccgaacaggctatggacaagccggtggtgggcgaagaagatattgctcag
gtagtcagtatgtggacaggtgtccctctggtacagcttaccggtgacgaaaccgaacgc
cttctccatatggaagatgctttgcacgagcggattatcggccaggaagaggctattgtt
accatatccaaggctgtcaggcgggcacgggccggtcttaaagatccccgtcaccccatt
ggcaactttgttttccttggacctaccggcgtgggtaaaaccgaattggcacgggcgctt
gcccagtttatgttcggttcggaagactctttggttcggctggatatgtccgaatttatg
gaaaaattcgctgtatcccgtctggtgggtgcaccccccggatatgtgggctatgatgag
ggcggccagctgacggaagctgttcgccgcaagtcatattgcctgatactgctggacgaa
atagaaaaagctcatcctgacgtttttaatattctccttcagatatttgatgatggccac
ctgacagatgccaagggcaggcgggtggacttcaggaataccattatcatcatgacctca
aacattggggctgaacttatccgcaagggtagcgggactatcggatttgccacccagaca
gacgaatcaaaggcccagcagaccaattttgagcacatgaaagacaagctgctgggtgag
cttaaaaagagtttccgtccggagtttttaaaccgtattgacagtgtggtggtcttccac
tcgctaaataaagagcagattcgcagtattgttgacctgatgctcaagagtgtggtcaag
cagatggctgaaaagggcatcgggcttgaggtgaccgaatctgccaaggacttgctgggc
aagaagggttatgatgaggtttatggtgccaggcctctgcgccgcactatccagaccatg
atagaagaccgcttgtctgaagacttgctgagggctaaatttaaagccggggataaagta
atagtggatactgccgaagacgaaataattgtccggctggccgaaccggctgagcttagt
caggctactccttaa
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