Dehalococcoides mccartyi DCMB5: dcmb_580
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Entry
dcmb_580 CDS
T02476
Name
(GenBank) PepT Family, periplasmic binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02010
ABC transporters
dmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dcmb_580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dcmb_580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
dcmb_580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmd02000
]
dcmb_580
Transporters [BR:
dmd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
dcmb_580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGG06208
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Position
566561..568156
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AA seq
531 aa
AA seq
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MMKKILLIILSVCLSFSLLLSGCGYAPEDNTMPTGNNVLTLVGQEPYTLDPAKVSDSGSV
TYIYQIFSGLLKMGDDLTPVADIAQNWEVSPDGLTYTFYLKPNVKFHNGRVLTAADFKYS
WERAASPATASNTVLTFLGDIQGVTEMVQGQANSISGVTVVDDLTLKVKLVSPCSFFLSK
ISYVTAFVVDKDNVSQGSDWWKKPVGTGPFMLPELTQGNYIMLNSNPDYYDTPAKISSVI
FRLQSGQPMDLYEVGGIDVAGVSADYLAKATDPDGVFSADLQVVSQLSFYYFAYVTSKAP
FDDPKIRQAFSMAVDKARIIELSYKGSVSVAEGILPPGMPGYNPDLSGLEYNPERARELI
AESSYGSVENLPTITLTASGWGGLLPVELEAVIDQWRQNLGVEVVVRQIDMERFLYDLQT
EKDNLYYSGWVADYPHPQDFLSVLFETTSSYNSGDYSNPEVDALLVQAAATLDTEESMQL
YAQAEQILINDAACLSFWFGKNYVLVKPYVKGYKLNAMGIPILTEVTLEAH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaatactgcttataatcctttcggtctgtctcagtttcagtttgcttcta
agcggctgtggctatgcaccggaagataacactatgcccacaggtaacaacgtccttaca
ctggtggggcaggaaccatatacccttgaccctgccaaggtaagtgacagcggttcggtt
acctatatttatcagatattcagcgggttgttgaaaatgggtgatgatcttactcctgtt
gcggatattgcacagaattgggaagtaagccctgacgggcttacctatacattttattta
aaaccaaatgtgaaatttcataacggccgtgtcttgactgctgcagattttaaatactct
tgggagagggcagccagcccggccactgcctctaatacggtgctgacctttcttggggat
attcagggcgtaaccgaaatggtgcagggacaggcaaactccatttcgggtgtgactgtg
gtagatgacctgactttaaaagtaaaactggtatccccctgcagttttttcctctcaaaa
atttcatatgtaactgctttcgtggtggacaaggataatgtatcccaaggtagtgactgg
tggaaaaaaccggtaggtaccggtccgtttatgctcccggaacttacccaggggaattat
attatgctaaacagcaaccctgactattatgataccccggccaagatttccagtgttatt
ttccgtctccagtccggccaacccatggatttatatgaagtgggcgggatagatgtggca
ggtgtaagtgctgattatctggccaaagccactgaccctgacggggttttttcagctgat
ttgcaggtagtgtctcaacttagtttttactattttgcctatgttaccagtaaagccccc
tttgacgaccccaagattcgtcaggctttcagcatggcggtagacaaagctcgtattata
gagctaagctacaagggaagtgtcagcgtggctgaaggcattttgccgccgggtatgccc
ggttacaatcctgacctgtctgggcttgagtataatccggaacgtgcccgtgaacttatt
gcggagtcttcctatggtagtgtggaaaatctgcccactattaccctgacagcctcaggc
tggggagggttgcttccggtggaactggaagcggtgattgaccagtggaggcaaaatctg
ggggtagaagtggtggtacgccagattgatatggaacgtttcctttatgaccttcagact
gaaaaagacaacctctactattccggctgggtggcagattacccccacccgcaggatttt
ctgtcagtgctttttgagaccacttcatcttacaacagcggagattactctaaccctgag
gtagacgcactgcttgtgcaggcggctgccactctggatacggaagaaagtatgcagctt
tatgctcaggcagaacaaatactgataaatgatgctgcttgcctgagcttttggtttggc
aagaactatgtgttagtcaaaccctatgtaaagggctacaagctgaatgcaatgggtatc
cccatacttacggaagttacccttgaagctcactaa
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