Dehalococcoides mccartyi DCMB5: dcmb_585
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Entry
dcmb_585 CDS
T02476
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
dcmb_585 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmd01007
]
dcmb_585 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmd03016
]
dcmb_585 (lysS)
Enzymes [BR:
dmd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
dcmb_585 (lysS)
Amino acid related enzymes [BR:
dmd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
dcmb_585 (lysS)
Transfer RNA biogenesis [BR:
dmd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
dcmb_585 (lysS)
Prokaryotic type
Other AARSs
dcmb_585 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGG06212
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All DBs
Position
complement(571604..573100)
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AA seq
498 aa
AA seq
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MPEEYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQENHLKEVLKLAG
RIMTRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSLMRTRT
GEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISV
IRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD
RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPF
GDITLDFTPPWPRLTMRDAVKQYAGIDFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDE
LVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPV
EQRARFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIR
EVILFPALKDREDTKTQE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagaatatttaaacgctcaaaagatggaaaaacttgaacggataaagagccgg
ggtatcaacccttatccgtccacttttcatcccagccataccagcgcacaggcagttgct
ttgctggttgagattgaaacacaggaaaatcatctgaaggaagtccttaagcttgccgga
cggataatgacccgccgtgatatgggcaagatttcctttatggatatacgtgacggcagt
ggtaaaatgcagatttttttccgtcagaatgaccttgacgaagccagtatagaactgctt
aaagacttggatttgggtgattttatcggggtagagggtagcctgatgcgtacccgcact
ggtgagcccagtctggctgctaccaaagtaagtatgctttcaaaatcactcctgcctctg
cctgagaaatggcacggcctgcaggatgtggagaaacgctaccgccagcgttaccttgac
ctgatttccaacgcagatgcccgccagaccttcctgacccgcagccgggttatcagtgtt
atacgtgcctttatgaatgctaaagggtttctggaagtagaaacacctgttcttcagcct
gaagcaggcggggcactcgcccgcccgtttattacccatcatcaggctttgaactgtgat
ttttatatgcgaatagctctggaactgcacctgaaaaggctgatagtgggcggttttgac
cgggtgtatgaaattgggcgtattttccgtaacgaaggcatctccaccaggcataacccc
gaatttaccatgatggaaagctaccaggcttacgctaactataaagacgttatggatttt
cttgaggaaatggtttcaagcgtggtcaaagagattagcggtggatacaccctgccgttt
ggagatattaccctggactttactcccccgtggccccgcctgaccatgcgtgatgctgta
aaacaatatgccggcatagacttttttgatttccccaccaaagaaacactggcagcagaa
atgacccgccgcaaactcaaagtagaccccgccaaagactgggggaaactggtagatgag
ctggtaggtgaatttgtagaaccccaccttgttcaacccactttccttactgaccaccct
gtggccatgtctccccttgccaaacagaaaccagaagacccccgcctgacagagcggttt
gaggccatctgcgcaaatatggaaatagccaacgctttttccgaactgaatgacccggta
gagcaaagggcacgttttaaagaacagcttgaaaaacgcagtcagctacgcacggacgaa
tctgaaagcgtggatgaagactttttggccgctctggcatacggtatgccgcccaccggc
ggtctgggtgtgggtattgaccgtctggtgatgctctttaccaaccatgactctatccgc
gaggttattctatttcctgccctgaaggaccgggaagacactaaaacacaggaataa
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