Dehalococcoides mccartyi DCMB5: dcmb_6
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Entry
dcmb_6 CDS
T02476
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
dcmb_6 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmd01007
]
dcmb_6 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmd03016
]
dcmb_6 (hisS)
Enzymes [BR:
dmd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
dcmb_6 (hisS)
Amino acid related enzymes [BR:
dmd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
dcmb_6 (hisS)
Transfer RNA biogenesis [BR:
dmd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
dcmb_6 (hisS)
Prokaryotic type
dcmb_6 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
zf-UDP
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGG05642
LinkDB
All DBs
Position
8333..9589
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AA seq
418 aa
AA seq
DB search
MYQSPRGTEDILPEDQPYWHFVRQQAARIAALYGYQRTDTPVFEDAGLFVRSVGEGTDIV
SKEMYTFEDRGGDKLTLRPEGTAPVCRAYLEHGMQTRTKPVKLYYLSSIFRYDRPQAGRY
RQHHQFGFEAIGEADASLDAEIIEMAWSFYNLLGITDLSLELNSIGCRQCRPNYISALKD
YYQQHAGKLCPDCNTRLDKNTLRLLDCKRAECQAVAGNAPRSADYLCPDCLAHYSRLKEC
LTILDLPFHENFRLVRGLDYYSRTVFEIQPMAEGAQSTIGGGGRYDGLIEQLGGEATPAM
GFATGIERIILNLKRQGIVPSPLPSPAVFLAYMGETAALASFALASDLRKAGIGIYQTYA
QKSIKAQLRQANSLGVDWVVILGEEELKQGCAVLRNMKEAGQANIPLDQLICEIKKQI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccagtcacccagaggtacagaagatatattgcctgaagaccagccttactggcat
ttcgtcaggcaacaagccgcccgtatagccgccctgtatggttaccagagaacagatacc
cctgtatttgaggatgccgggctgtttgtacgcagtgtgggtgaagggacggatattgtc
tccaaagaaatgtatacgtttgaagaccggggcggagataaactgaccttgcgccctgag
gggactgcacctgtctgccgggcgtacctggagcatggcatgcagacccgtaccaagccg
gtcaagctttattacctgagctctattttccgttatgaccgccctcaggccgggcgttac
cgccagcaccatcagtttggttttgaagctattggcgaggctgatgcttcgctggatgct
gagataatagaaatggcctggagtttttacaatctgctgggcattaccgacctttcgctg
gaattgaacagcataggttgccggcagtgccgcccgaattatatttcggcacttaaagat
tactaccagcaacatgcgggcaaactctgccctgactgtaatacccgtctggataaaaat
actctgcgcctgctggactgcaaacgggcggaatgccaagctgtggctggaaatgcccct
agaagtgcagattacctttgcccggactgccttgcccactatagccgcctgaaagagtgt
ctgacaattttagacctgccatttcatgagaatttccgtctggtaaggggtcttgattat
tacagccgcacggtttttgaaattcagcccatggcagaaggtgcccagagcaccattggc
ggcggcggacgctatgacgggctgatagaacagcttggcggagaggctaccccggctatg
gggtttgctaccggtattgagcggattattttaaacctgaagcgtcagggtattgtgcct
tctcccttgccgtctcccgctgtttttctggcctatatgggagagacagcggctttggct
tcatttgctttggcatcagacctgcgtaaagcaggcatagggatataccagacatatgcc
cagaaaagcatcaaggctcagctcaggcaggctaacagtttgggggtagactgggtggta
atactgggtgaagaagaactgaagcagggctgtgccgttcttcggaatatgaaggaagcc
gggcaggcaaatatacctcttgaccaacttatatgtgagataaagaagcagatatga
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