KEGG   Dehalococcoides mccartyi DCMB5: dcmb_635
Entry
dcmb_635          CDS       T02476                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
dmd  Dehalococcoides mccartyi DCMB5
Pathway
dmd00470  D-Amino acid metabolism
dmd00550  Peptidoglycan biosynthesis
dmd01100  Metabolic pathways
dmd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:dmd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    dcmb_635 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    dcmb_635 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    dcmb_635 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dmd01011]
    dcmb_635 (ddl)
Enzymes [BR:dmd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     dcmb_635 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:dmd01011]
 Precursor biosynthesis
  Amino acid ligase
   dcmb_635 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C GARS_A CPSase_L_D2 ATP-grasp_3 ATP-grasp_4 ATP-grasp RimK TTL
Other DBs
NCBI-ProteinID: AGG06262
LinkDB
Position
625817..626833
AA seq 338 aa
MRIGLSYDLKLALTPVTGGPDDALEEYDSPETVEAITNSLTAAGHAVYRLGGGKEFLRKV
QEQKLDLVFNISEGLGNYRSREAQIPGVLEMLDIPYTGSDPQTLAICLDKPLTKKLVAGA
GVKTAKWQLVSNCEELSTIDWSDFPLPAFLKPACEGSSKGVRFASRAESTDEIMRMATEL
LTTYNQPVLVEEFINGDEITVGVIGNDKPKVLGIMRIVPKTKADYFVYSIEIKRNWRQMV
EYEVPAALPAKTLARIEKATLDAYRVLECHDLCRMDFRVSPDGTPYFLEVNPLPGLNPVS
GDLPIMASKLGISHADLVLEILNTAIARHNLVAADCLA
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgcgaatagggctgtcatacgatcttaaactggctttgaccccggtaaccggcggccct
gatgatgcgttggaggaatatgactcaccggaaacggtggaggctataacgaactcctta
acagcggctggacatgctgtttaccgtttgggcgggggtaaagaatttttacgcaaggta
caggaacagaaactggatcttgttttcaatatttcagagggtttgggtaactaccgcagc
cgcgaagctcaaattcccggtgttttagagatgttagatataccttacaccggttcagac
ccgcagacactggcaatctgtctggataaaccactaaccaagaaattggtggctggtgcg
ggcgtaaagactgccaaatggcagttggttagcaactgtgaagagctttcaaccatagac
tggtcggatttccctttgccggctttcctgaaaccagcctgcgagggttcaagcaagggt
gtgcggtttgcttctcgggcggaaagtaccgacgagataatgaggatggctacagaactt
ttaactacctataaccaacctgttttggtagaggaatttataaatggcgacgaaattacg
gtaggtgttatagggaacgataagcctaaagttctgggtataatgcggattgtgcctaaa
accaaagccgattattttgtgtattccattgagataaaacgcaactggcggcagatggta
gagtatgaagtaccggcggcattacccgccaaaactctggcccgtattgaaaaagccaca
ctggatgcgtatagagtactggaatgccatgatctatgccggatggattttagggtaagc
ccggatggtacgccgtattttctggaggttaacccgcttcccggtcttaaccctgtcagc
ggagatttacctattatggcatctaaattaggtatcagccacgcagatttggtgttagaa
atacttaacactgccattgcccgccacaatttggtagcggcagactgtttggcctga

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