Dehalococcoides mccartyi DCMB5: dcmb_880
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Entry
dcmb_880 CDS
T02476
Symbol
faa
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00061
Fatty acid biosynthesis
dmd01100
Metabolic pathways
dmd01212
Fatty acid metabolism
dmd02024
Quorum sensing
dmd04146
Peroxisome
Module
dmd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
dcmb_880 (faa)
00071 Fatty acid degradation
dcmb_880 (faa)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
dcmb_880 (faa)
09145 Cellular community - prokaryotes
02024 Quorum sensing
dcmb_880 (faa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmd01004
]
dcmb_880 (faa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmd04147
]
dcmb_880 (faa)
Enzymes [BR:
dmd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
dcmb_880 (faa)
Lipid biosynthesis proteins [BR:
dmd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
dcmb_880 (faa)
Exosome [BR:
dmd04147
]
Exosomal proteins
Exosomal proteins of breast milk
dcmb_880 (faa)
Exosomal proteins of breast cancer cells
dcmb_880 (faa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGG06491
LinkDB
All DBs
Position
complement(849924..851816)
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AA seq
630 aa
AA seq
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MAEVDTIPKLVKHNAEQWGDKPAMCMKNLGIWQKYTWSDYYQTVKYFGLGLLSLGTKPSD
RVAIIGDNEPEWFWAEFAAQSIGAIPTGIYVDSIPDEVKYIASHAEVRVAVVNDQEQADK
FLELLPELPNLIKIIYWDPKGLKNYDDPMLVSFKEVIKLGREYEKANLDLFERLLDTTKP
DDIAFVYYTSGTTGLQKGAMLSHRSLITTAKGFVARYPLSYKDDLISNFPASWVGDSFFA
TIPHILSGARLNFPEEPETVAEDTREIGPNFVIYGPRQWESLVSEIQVKIMDAHPLKRLA
YKVLSPVGYKMAEKTLTGGKPGLPLMVGHKIADALLFHPLKDKLGVSKVRFGVTGSSVLS
LDTFKMIHSMGIELRQNYASTEAGFISSHGKGDISFESVGRPALGTEVRLTDEGELLIRS
DCMFSGYYKDPERTAQSFRDGWFATGDAVNINEKGHLIFLDRLKDLGVLANGIKYAPQYI
EGRLRFSPYIKDAMVVGGEDKEYVTAIINIDFTMVSKWAQKNRLNFTTYVDLSQKNEIAD
LVAKDLMRVNSYLPEGSRVRKFVLLHKEFDPDEAELTRTRKLRRGFVSERYKDLIDAMYH
LNKEVKVEAAVTYRDGRKGVVTTSIKVRSL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtagacacgatacccaaactggtaaaacataacgccgagcaatggggcgat
aagcctgccatgtgtatgaaaaatctgggtatatggcaaaaatatacctggagtgattat
tatcaaaccgtaaaatatttcggtttgggtttgcttagcctgggtaccaaaccttccgac
cgggtggctattataggcgataatgaacccgaatggttttgggcggaatttgccgcccag
tctattggtgcaattcctaccggtatatacgttgattccatacctgacgaggttaaatat
attgccagccatgctgaagtaagagtggcagtggtaaatgaccaagaacaggcagacaaa
tttcttgagctgctgcccgaactgccaaacttaattaagattatttactgggatcccaaa
gggcttaaaaactacgatgaccccatgcttgtaagctttaaagaagtaataaagctgggc
agggaatacgaaaaagccaatctagatttatttgagcgactgctagatactaccaaacca
gatgatatagcctttgtttattacacttcaggtactaccggcctgcaaaaaggggctatg
ctcagccaccgttcccttattactactgcaaagggttttgttgcccgttacccgctgagt
tataaagacgatcttatttccaatttccctgcctcatgggtgggggacagtttttttgcc
actataccccacattctctccggggcacgcctgaattttcctgaagaaccggaaacggta
gccgaagatacccgtgagattgggcctaacttcgtcatatacggcccgcgtcagtgggaa
agtctggtaagtgagatacaggtaaaaataatggacgcccaccccttgaaacgtttggct
tataaagtgctttcacccgtgggatataaaatggccgaaaaaactctcaccggaggcaag
cccggtttgcctctcatggtaggccataaaatagcagacgctctgctgtttcatccattg
aaagataaacttggagtcagcaaggtaagattcggggttaccggaagttcggtgctttcg
ctggatacttttaaaatgatacattccatgggtattgagctaaggcagaattatgcttca
actgaagccgggtttatttcttcccatggcaagggtgatataagctttgaaagtgtggga
cggccggcgctgggtactgaggtacgcctgacagatgaaggtgaactccttatccgcagt
gactgtatgttcagcggctattacaaagatcctgagagaactgcccaaagttttcgggat
ggctggtttgctactggtgatgctgtaaatataaacgaaaagggccacctgatattcctt
gaccgccttaaggacttgggagtgctggcaaacgggataaaatatgcccctcagtatatt
gaaggacgcttgcgtttcagcccttatataaaagatgccatggtagttggcggtgaagac
aaggaatatgtaaccgctattataaatattgatttcactatggtaagcaaatgggcacag
aaaaaccgtttgaatttcactacctatgtagacctttcccagaaaaatgaaatagctgat
ttagtggccaaagaccttatgagggtaaacagttatttgccggaaggttctagggtaagg
aaatttgttttgctgcataaagagtttgaccccgatgaagctgaacttacccgtacccga
aaacttcggcggggatttgtatccgaaagatataaagacctgatagatgccatgtaccat
ctgaataaggaagtaaaggtggaagcggcggtaacctatcgggacggacgcaagggtgtg
gtaactaccagtataaaagtaaggtctttgtag
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