Dehalococcoides mccartyi DCMB5: dcmb_916
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Entry
dcmb_916 CDS
T02476
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmd03016
]
dcmb_916 (truB)
Enzymes [BR:
dmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
dcmb_916 (truB)
Transfer RNA biogenesis [BR:
dmd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
dcmb_916 (truB)
Prokaryotic type
dcmb_916 (truB)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AGG06525
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All DBs
Position
complement(884351..885253)
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AA seq
300 aa
AA seq
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MDGILNINKPFGITSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGVETDSYDSEGEITFRKTCDYVTREMIYKTLMDFQGEIIQIPPMYSAV
KHRGMRLYNLARQGIEVERIPRVATIYGIELLNYTSPVLRVRIECGHGTYIRSLAFDLGR
KLGCGAYLKSLVREAYGQFNLANSLDFADLEAAKCDGKLAGILLPLETAIGHLPRVSLDE
KNITRLVNGLEITLDRIDKPEAVAVYNAENSFVAIIQPETDGTWHPAKVFIRQSPKPDAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctgaatatcaacaaacctttcgggataacctcgtttgatgtagttgca
aaagtcaggcgtatttattcccaaaaaagggtagggcatgggggtactcttgacccgtat
gcaaccggagtaattccggtgtttttgggaagatctacccgtcttatagagtatctttcc
tccgtcagcaagacatatctggctgaaatagagctgggagtggagacggatagctatgac
agcgaaggcgaaatcactttccgcaaaacctgtgactatgttacccgtgaaatgatatat
aaaactttgatggattttcagggtgagataatccaaattccccctatgtatagtgccgta
aaacaccgcgggatgcgtctttacaatctggcaaggcaagggatagaggttgaaagaatt
ccccgggtagccacaatttatggcattgaactgcttaactacacttcaccggtactgcgt
gtacggatagaatgcggacacggcacatatattcgttctctggcctttgacttgggtaga
aaactgggttgcggggcgtatctgaaatctctggtaagagaggcatatggccagtttaat
ctggcaaactctctggattttgctgaccttgaggccgcaaaatgtgacgggaaactggca
ggtattctcctcccgctggagacagccattgggcatctgccaagagtttcccttgatgaa
aagaatataacccgcttggtaaatggtctggagataacactggataggattgacaaacct
gaggctgtggccgtatacaatgctgaaaacagtttcgttgctataatccagccggagact
gacggtacttggcatccggctaaagtcttcataagacaaagcccgaaaccggatgcaaat
tag
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