KEGG   Dehalococcoides mccartyi DCMB5: dcmb_95
Entry
dcmb_95           CDS       T02476                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dmd  Dehalococcoides mccartyi DCMB5
Brite
KEGG Orthology (KO) [BR:dmd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dmd02048]
    dcmb_95
Enzymes [BR:dmd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     dcmb_95
Prokaryotic defense system [BR:dmd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    dcmb_95
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Cas3_HD HD AAA_22 HDOD PhoH ThsB_TIR ARM_FBXO47 KELK
Other DBs
NCBI-ProteinID: AGG05728
LinkDB
Position
97899..100319
AA seq 806 aa
MKESSKYIARYNPETERYQYVADHLLEVAIICSGFSSKIGLKNCGYVTGLLHDLGKYSAE
FQKYIRINTGLRRVASSHTDFSCPKPDHSSAGGQYIRKALISGDTQAEIVAQAIAIAVFS
HHTGLPDCIGLDGTDNLIFRFKKEDLKTHLSEVSGKMESQVKEKLNSHLQSEVYKQEFGQ
LVEAVQSLKESSCVSNIHLGLALRFLFSALIDADRLNAAGRKPLLKQIWNAQVKNLEDYL
LTFKTDTPLNLIRQQVSDTCLKRSPEKPGLYKLSVPTGGGKTLSSLRFALHHAHKHSLER
IFYIAPYTTILDQNATVIRQVLNVQAENPLILEHHSNILEDTGNPVNEQLAENWEAPIVL
TTSVQFLETFYSNKTGCTRRLHNLAKSVVIFDEVQALPDEMIYLFNNTVNFLTRMCDSTV
LLCTATQPPLDKVDDMKGTIYFSASAELAPNPNELYLKLNKRVKVENRCKDGGHTNEEVQ
NIIREQATQSKKILVVVNTKTQARELYASLKIEFANIYHLSTSMCPCHRRETLSKLKEKL
ESVEPSSRPLVCISTQLIEAGVDIDFEVVVRYLAGMDSITQSAGRCNRHFRQEQGLVILL
NPAGETLKHLQDIETGKFITNRVLTEYATCPETYQNHLLHPELLARYYHYYFFKQKNKMD
YQEKINGISESILNMYSNQHNGVAAYNRINKESPKLYFSQAFKTAGDHFKVIDNSAKGII
ANCNSEAENIITRLCASQNITELNLLLKKAQQYSVNLFEYEFEKLAELKGLHETQPESGI
FYLDKNFYNSETGVSAEPNQSAFTFF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgaaagaatcttctaaatacatagctagatataatccagaaaccgaacggtaccagtat
gttgcagaccatcttttagaggttgccattatttgtagcggctttagttctaaaataggt
ctgaagaattgtggctatgtaactggactgctacatgatctgggcaaatacagcgctgaa
tttcagaaatatatccgaatcaataccgggctcagaagagtggcttcaagtcacactgat
ttctcttgccctaaaccagaccattccagcgctggcggacaatatataaggaaagccctt
atctcaggtgatacccaagctgaaatcgttgctcaggctatagctatagctgtattttcc
catcacactggactgccggactgcattggtttggatggcacagataacctgatctttagg
tttaaaaaagaagatcttaaaacccacctttcagaggtttctggcaaaatggaaagccag
gttaaggaaaagttaaattcacaccttcagagtgaggtgtataaacaagagtttggtcag
ctggttgaagctgttcaaagtttaaaagagtcaagctgtgtttccaatatccaccttggt
ctggctctgcgttttctgtttagcgctctcatagatgcagatcgcctaaatgcagccggc
cgcaaacctcttctcaagcaaatatggaatgcacaagttaaaaatcttgaagactacctc
cttacattcaaaacagatacacctttaaacctgatacgccaacaagtttccgacacttgc
ctgaaacgttctcccgaaaagccggggttatataaattaagcgtccctaccgggggaggc
aaaacactatcaagcctgcgttttgccctgcaccatgcccataagcactcactcgaacgc
atattttacatagcaccttataccaccatacttgaccagaacgctacagttatccgccaa
gtgttgaacgtacaggcagaaaacccgcttatacttgaacatcattcaaacatattggag
gacactgggaacccagttaatgagcaactggccgaaaactgggaagcccccattgttcta
accacttcagtccagtttttagaaacattttactcaaacaaaaccggctgtacccgcagg
ctgcataatctggccaaatcagtagtaatttttgacgaagtgcaggcgcttccagacgag
atgatatatctcttcaataacactgtaaatttccttacccgcatgtgcgatagcaccgtc
ttgctgtgcactgccacccaaccaccacttgataaggtagatgatatgaagggcactatc
tattttagcgcttctgccgaacttgccccaaacccaaatgaactttatttaaagctaaat
aaaagggttaaggtggaaaaccgatgtaaagatggtggacataccaatgaagaagtgcaa
aatataataagggaacaagcaacccaaagtaagaagatacttgtagtcgtaaataccaaa
acccaagcacgggaactttatgcctctttgaagattgagtttgcaaatatctaccacctt
agtaccagcatgtgcccctgccaccgacgggaaacactaagtaaactaaaagaaaaactt
gaaagcgtagaaccctcttcccgtcccttggtctgtataagtacccaactaatagaagca
ggggtagatatagattttgaggtagtagtacgttacttggcaggaatggattccataacc
caatctgcaggccgttgtaaccgccatttcagacaggaacaggggttggttatcctttta
aatccagccggggaaactttgaagcacctgcaggatattgaaaccggcaaatttattacc
aacagagtactcacagaatatgccacttgtccggaaacataccaaaaccatctactacac
cctgaacttctggccagatattaccactactatttttttaaacaaaaaaacaaaatggat
tatcaagaaaaaataaatggtatatcagaatccatccttaacatgtattcaaaccagcac
aacggtgtagctgcctataatcgtataaataaagaatctcccaagctttatttttcgcag
gccttcaaaacagcaggagaccactttaaggtaatagacaattctgcaaaaggcataatt
gcaaactgcaactcggaagccgaaaacataataactcgactctgcgccagccaaaatatc
accgaactgaacttacttttaaaaaaagcccagcaatactcagtaaatctgtttgaatat
gaatttgaaaaacttgccgaattaaaagggttgcatgaaacccaacctgaaagcggcata
ttctatctagataaaaacttttacaactctgaaacgggggtgagcgcagaaccgaatcaa
agtgcatttacattcttctaa

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