KEGG   Dehalococcoides mccartyi DCMB5: dcmb_97
Entry
dcmb_97           CDS       T02476                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
dmd  Dehalococcoides mccartyi DCMB5
Brite
KEGG Orthology (KO) [BR:dmd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dmd02048]
    dcmb_97
Prokaryotic defense system [BR:dmd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    dcmb_97
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AGG05730
LinkDB
Position
101085..103043
AA seq 652 aa
MSWMYDLYQTYQNCISIVGKENGKIPLNPVGHVTVKQAHIEVRLDGNGNFKGAEVITNPN
KARTIIPATEKSAGRTSGPEAHPLCDKLQYSARDYKESCGEKPPHFDKYIEQLADWATSE
YAHSKVKAVYQYQKNANLISDLIRHKILIPDKYGKMLEKWEGDKKDEPLIFRATKQQAES
FVRWRVEIEGDPCPELHLDKAVWENWQQYLQSKEPVKGFCCVSGKETSLATHHPRKIRSD
GDGAKLISSNDTANFTFRGRFTQAEQACSIGFDVTQKAHSALRWLIGLQGKNYDNLSVVA
WAISGNNIPNPTQNTYELFPQTEQEAQASTPYTAQEVSSSLIKLIGGYKAKLAPTENIAM
LMLDSATSGRISIKFYQRLTSADFLEKLYAWHNPDIGCSWHQYFSKTQKFLGAPSAANIA
SIVYPGSNKGDNNMRANAISCILPSIIQGRPLPRDIIQSCIRQTIRLGGIKSKQKDTKDI
KTPNNWFLFEKALGIACALYRYQNKNRRYQVSLERDRTSRDYLYGRLLAVAEALEQSTLD
NNSENRSTNAERLFQKFAERPFYTWSILEPLLNPYKMRLRNKNPNYLIFYQKKLDEIACK
FLPEDFTSDKKLSGEFLLGYHCQRADIYREKVLKEEAPEEDSLEDHTETHKN
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgagttggatgtatgacctgtaccaaacataccaaaactgcataagcatagtaggaaaa
gaaaacggcaaaataccgctaaacccggtagggcatgtaaccgtaaaacaagcccacatt
gaagtccgactagatggaaacgggaatttcaaaggggcagaagtaataacaaacccaaat
aaggccagaacaattatacctgctaccgaaaaatctgccggcagaaccagcggacccgaa
gcccaccccttgtgtgacaaattacaatactcagccagagattataaagaatcctgtggg
gaaaaacccccacattttgataagtatattgagcaactggcagactgggcaacttcagaa
tatgctcactcaaaagtaaaagccgtttaccagtatcagaaaaacgccaaccttatttca
gatcttattagacacaaaatacttatccctgataaatacggtaaaatgcttgaaaaatgg
gaaggggataaaaaagacgaaccactcatttttagagcaaccaagcaacaagcagaatca
tttgtacgatggagagtggaaattgaaggagacccatgccctgaactccatctggataaa
gctgtctgggaaaactggcagcaatacttgcagagcaaagagcccgtcaaaggcttttgt
tgtgtgagcggtaaggaaactagtctggccacccaccaccctaggaaaattcgctcagac
ggagatggagcaaaactcatttcttcaaacgataccgcaaacttcaccttcagggggcgt
tttactcaggcagagcaggcttgcagtataggcttcgatgtcactcagaaagcccacagt
gcactgcgctggcttattggtctgcaagggaaaaactatgacaatctttcagttgttgct
tgggcaatctccggcaacaatataccaaaccccacccaaaatacctacgagctttttcct
cagacagaacaggaagcccaggccagcaccccttatacggctcaggaagtatcttcctca
ctcataaagctcataggcggatacaaagccaagcttgcgcctacagaaaatatcgcaatg
ctcatgctggactctgctactagtgggcgtatctcaataaagttctaccaacgccttact
agtgcagattttctggaaaaactatatgcctggcacaatcctgatataggttgcagttgg
caccagtatttctccaaaacccagaaattcctaggcgcaccctcagccgccaatattgcc
agtattgtctacccgggaagcaataagggagataacaatatgcgcgccaatgccatcagt
tgcatactacccagcataatccagggaaggcctctcccccgggatataatccaaagctgt
ataaggcagacaatccgcctcggaggcattaagagcaaacaaaaagataccaaagatatt
aaaactccaaacaattggtttttgtttgagaaagccttgggtatagcctgcgccctttac
cgctaccagaataaaaacaggaggtatcaggtgtccttagaaagagaccgcaccagtcgg
gattatctttatggaaggctgttagcagtagccgaagcactggagcaatctaccttagac
aataactcggaaaatcgctcaacaaatgcagaacgactcttccagaaatttgccgaacgt
cctttttatacttggagcattctcgagccacttcttaacccttataaaatgcgcttaaga
aataaaaacccaaactaccttatattctaccagaagaaattggatgaaatagcttgcaaa
ttcttgccggaagactttaccagcgataaaaaactgagcggtgaatttttactgggatat
cactgccagcgggcagatatctatcgggaaaaagttcttaaagaagaagctccagaagaa
gattctctggaagatcatacagaaacgcataaaaattaa

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