Dehalococcoides mccartyi DCMB5: dcmb_971
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Entry
dcmb_971 CDS
T02476
Name
(GenBank) pyridoxal-phosphate dependent TrpB-like protein
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00260
Glycine, serine and threonine metabolism
dmd00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dmd01100
Metabolic pathways
dmd01110
Biosynthesis of secondary metabolites
dmd01230
Biosynthesis of amino acids
Module
dmd_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
dcmb_971
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
dcmb_971
Enzymes [BR:
dmd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
dcmb_971
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AGG06573
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All DBs
Position
926806..928170
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AA seq
454 aa
AA seq
DB search
MVQTKFILQEKDMPQVWYNIQPDLPVPLPPVLHPGTGKPVTPADMEAIFPMNLIMQEFSP
ERHIPIPEELLELYKIWRPTPLYRAHRLEKALQTPAKIFYKLEDVSPAGSHKPNTALAQA
YYNKQAGIKRISTETGAGQWGSSLAMACKFFDIECKVYMVKVSYNMKPYRRIMMETWGAS
VVPSPSPDTRIGREILERDPECPGSLGIAISEAVEDAVTHPGTKYALGSVLNHVLLHQTI
IGQEAKKQMAMADCYPDIVIGCVGGGSNFGGIAIPFVEDKLNGTHKDTRILAVEPASCPS
LTKGLDAYDFGDEAGMTPMMKMFTLGHQFMPPPVHAGGLRYHGMSPLLSHLSRLKLIEAT
AVQQIETFEAGMQFARTEGFISAPETNHAIRATIDEALKCRETGEAKTILFCHSGHGHVD
MASYDLYLRGKLSNYEYPAELVKEAQKGLPKVNV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaccaagttcatactgcaggaaaaggatatgcctcaggtctggtacaatatc
cagcctgatttgcccgtaccgctgcctcccgttttgcatccgggcaccggcaagccggtc
actccggctgatatggaagctatattccctatgaaccttatcatgcaggagttcagcccc
gaaaggcatatacccatcccggaagaactgttggaactatataaaatctggcggccaacc
cctctttaccgtgcccaccggctggaaaaggctttgcagactccggctaaaatcttttac
aaactggaagatgtcagcccggccggttcacacaaacccaatactgccctggctcaggct
tattacaataaacaagccggcataaagcggatttccaccgaaaccggcgccggacaatgg
ggttcttctctggctatggcttgcaaattctttgacatagagtgcaaggtctatatggta
aaggtaagctacaatatgaaaccttaccgccgcattatgatggaaacctggggtgcctct
gtcgtacccagccccagcccggatacccgaataggccgtgagatactggaacgtgacccc
gaatgccccggcagtttaggtattgccataagtgaagctgtggaagatgctgtaacccat
cccggcaccaagtatgctctgggtagtgtacttaaccatgtactccttcaccagactatt
atcggtcaggaagctaaaaagcagatggccatggcagactgctaccctgatattgttatt
ggctgtgttggcggcggttcaaactttggcggtatcgctataccctttgtggaagacaaa
ctgaacggtactcacaaggatacccgcattttggcagttgagcccgccagctgtccttca
ctgaccaagggtctggacgcctatgacttcggagacgaagccggtatgacccctatgatg
aaaatgtttacgctgggtcaccagtttatgccacctccggtacatgccggcgggttgcgg
tatcacggcatgtctcccctgctgtctcacctcagccgcctgaagctgattgaggctaca
gcggttcagcagatagagacctttgaagcgggcatgcagtttgcccggactgaaggcttc
ataagcgcacctgaaaccaaccatgccatcagggctacaattgatgaagccttgaaatgc
cgcgaaaccggcgaagccaagactattcttttctgccacagcggtcacggccacgtggac
atggcttcttacgacctgtacctgcggggcaagctcagtaactacgaatacccggcagaa
ctggtaaaagaggctcagaagggtttgcctaaagtcaacgtctag
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