Dehalococcoides mccartyi DCMB5: dcmb_998
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Entry
dcmb_998 CDS
T02476
Name
(GenBank) PepT transporter family, periplasmic substrate binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02010
ABC transporters
dmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dcmb_998
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dcmb_998
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
dcmb_998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmd02000
]
dcmb_998
Transporters [BR:
dmd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
dcmb_998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGG06599
LinkDB
All DBs
Position
complement(951846..953522)
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AA seq
558 aa
AA seq
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MKGKLLYLLAALLIIVPIVFSGCTSDDNDDDGDDGTVTTPQVFRVNLAGEPNTIDPNKAS
WATERSVIMLLFVGLLDFNSDLSLKAACAQEIPTVANGGISADGLTYTFKVKSNVTWSDG
SKVTAHDFEYSIKRMLDPDTAAEYASFYFDIVGAAAFNAAASADAATKTALRNAVGVTAV
DDTSLRITLAQTRPTFLSIMALWPTSPVKESVITAKGNLWTEAGNLIGNGPYTLKEWVHQ
DHMTFTLNTNYWDTKPTLTEIKYLMILDATQELSAYKNGELDMARVPVGTETATLADPVY
GKQVVRNNDLTTFAFQFNVNKAPFDNLLVREAMSCAIDRVAFVEQVRGGVGTPAYSWIPP
GMPGYDADLGKDFAFNVTKAKQLLADAGYPNGVGMPELKFQYADTASNRTIAQFLQAQLK
TNLNLDLTLEPMEPAAFSAFVNSEQHTWAWFGWGADYPDPDNWLPDLFGTGGGNNHTGYS
NPAFDTLARQAMMELDNTLRLQMWAQAQEIVMADMPIVTMFYRERFYVVQPYVKGLEPTG
MDGGIMGDTSLVNVSIVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaagttattatacctgctggcagccctgttaatcattgtgccaatagtgttt
agcggttgtaccagtgacgacaacgatgacgacggggatgacggaactgtcaccactcct
caggtattccgtgtcaatctggcaggtgaacccaacaccatagatcccaacaaggcttct
tgggctacggagagatctgtaatcatgctactctttgtaggtctgctggactttaactca
gacctgtccctaaaggcagcgtgtgcccaggaaattcccaccgtggctaacgggggtatt
tcagcagatggtttgacctataccttcaaagtcaaatcaaacgtgacctggagcgatggc
tcaaaggttaccgcccatgactttgagtatagcatcaagagaatgctggatcccgacaca
gctgcagaatatgcatctttctactttgatattgtaggtgcggcggcatttaatgctgcg
gccagtgctgatgcagctaccaagactgccctgcggaatgctgtgggggtgacagcggta
gacgataccagtctgcgcattaccttggctcagacccgccccaccttcctgtctattatg
gctctttggcctacctcaccggtaaaggaaagcgttattactgccaagggtaatttgtgg
actgaagccggcaaccttataggtaacgggccgtataccctgaaagaatgggtgcatcag
gaccacatgacgttcactctcaataccaattattgggataccaagcccaccctgactgag
attaagtacctgatgattctggatgcaacccaggaattatcggcttacaagaatggtgag
cttgatatggccagagtcccggtaggcacggaaacagctactttggctgatccggtttac
ggtaagcaagtggtacggaacaatgaccttactacttttgctttccagttcaatgttaat
aaagccccctttgataatctgctggtacgcgaggctatgtcctgtgccattgaccgggtg
gcctttgtggagcaggttagaggcggggtaggtactccggcttattcgtggattccgccc
ggcatgcctggttacgatgctgatttgggcaaagattttgcttttaatgtcaccaaggcc
aaacagcttttggctgatgccggctatcctaatggggttggcatgcccgaactcaaattc
cagtatgcagatacagcgagcaaccgaactattgcccagttcctgcaggctcagctaaag
accaatttaaatcttgatcttacccttgagcctatggaaccggcagcctttagtgccttt
gtgaacagcgaacagcatacttgggcctggtttggctggggtgctgactatcctgatccg
gacaactggctacctgacctgttcggaaccggtggtggcaacaaccataccggatattca
aatcccgcttttgatacgctggccagacaagccatgatggaacttgataatactctgcgc
cttcaaatgtgggctcaggctcaggaaattgttatggcagatatgcccattgtaaccatg
ttctaccgtgaacggttctatgttgtacagccgtatgttaaagggctggaaccaaccggt
atggatggcggcataatgggtgatacttcattggtcaatgtctctattgtgaagtag
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