Drosophila melanogaster (fruit fly): Dmel_CG10689
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Entry
Dmel_CG10689 CDS
T00030
Symbol
l(2)37Cb
Name
(RefSeq) lethal (2) 37Cb
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmel_CG10689 (l(2)37Cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dme03041
]
Dmel_CG10689 (l(2)37Cb)
Enzymes [BR:
dme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmel_CG10689 (l(2)37Cb)
Spliceosome [BR:
dme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Dmel_CG10689 (l(2)37Cb)
Complex C
U4/U6.U5 tri-SnRNP related factors
Dmel_CG10689 (l(2)37Cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
SRP54
Cas3-like_C_2
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
35192
NCBI-ProteinID:
NP_609946
FlyBase:
FBgn0086444
UniProt:
Q9VIZ3
LinkDB
All DBs
Position
2L
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AA seq
894 aa
AA seq
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MSGKNRKRTASSSSSGEEPDSEEESRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRA
IEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTK
REKEEREYKKQLLNIAKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQK
KWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKER
KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKM
IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS
EPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDA
PIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEV
LHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNII
YVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHEL
EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGE
LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTA
RKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEI
DMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLY
HELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGRAEMAQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaaaaacagaaaacgcacggccagcagcagcagcagcggtgaggagccggac
agcgaggaagagtctcgcctaaaggacctgcaggagcgcgacgagttcgccagccggctg
aagaagcgggatgacgatcggacgcgcaatgtggttgattccaccggcggacgaagggcc
atcgaggaggccaccaagcgactgaagcttgagcatgaggatcgggacaagatagtgcct
cacctgcgtctgcagtcgcgtcgccagtacctggagaagcgcaaggatgacaaggtggcc
gagctggaggcggacatcctggacgatgagtacctcttcgatgagagcgtcctgaccaaa
cgggagaaggaggagcgcgagtacaagaagcaactgctgaacatcgccaaggagcacgag
aaggcgcgggaactagagcgcatccagcgttataatatgccgcaggacctgaaaaaggga
gagcgatctgaatacgttgaggttgatgagtttgagaagcaacccaactcagagcagaag
aaatgggaggctgaacagctggcttcggcgcgtttccatttcggcgcgaaagatgccaag
gcggaggaggagtatgagctgctacttgacgatcaaatcgatttcatccaagcccttacc
ctggacggaagtcgagagaaatcatctagccgacagcccgaactcacggagaaggaacgc
aaacgtttgacattggacgaaaccagaagatcactgcccgtttatccgttcaaggaggat
ctgattgctgctgtaaaggaacatcaggtgctcatcatcgaaggagaaacaggctcgggc
aaaacgacacaggtgccgcagtacctcgtggaagctggtttcaccaaggacaagaagatg
atcggatgcacgcaaccacgtcgtgtggccgccatgtcggtggcagcacgcgtggccgag
gaaatgggcgtgaagctgggcaacgaggtgggctacagcatccgtttcgaggactgcacc
tcggatcgcaccattctcaagtacatgacggacggcaccctgcatcgagagttcctttcg
gaacccgacttggcctcctacagtgtgatgattatcgatgaggctcacgaacggacactg
cacacggacattttgtttggcctggtcaaggatattgctcgctttagaccagagttgaag
ctgctcatttccagtgccactctggatgcggaaaagttctccgcgttcttcgatgatgca
cccatctttcggatacctggtcgccgctatccagtggacatattctacaccaaggctccg
gaagcggactacatcgacgcgtgttgcgtttcagttttgcagattcatgccactcaacct
ttgggcgacattctagtcttcctcacgggtcaggatgagatcgagacttgccaggaggtt
ctgcatgatcgcgtaaagcggctgggctccaaaatacgtgagctgatcgttatacccgtc
tatgcgaatctaccgagtgatatgcaggccaaaatcttcgaacccacaccgccgaatgcc
cgaaaagttatcctggccacaaatatcgcagagacttcgctaaccatcgacaacatcatt
tatgtaattgatcctgggtttgccaagcagaacaattttaattcccgcactggcatggag
tcgcttatggtggtgcccatttccaaggcctccgccaatcagcgagcgggcagagcggga
cgaactgctccgggaaagtgcttccgtctgtatacggcgtgggcatacaagcatgaactg
gaggacaataccgttccggagatacagcgtattaatctgggcaatgcggtgctcatgcta
aaggctctgggcatcaatgatctgatacacttcgactttctggaccctccgccgcacgag
acactggtattggctttggagcagctatatgccctgggtgcacttaatcaccatggagag
ttaaccaagctgggtcgacggatggccgagtttcccgtggatcccatgatgggcaagatg
ctgctggcaagcgaaaaatacaaatgctccgaggagatggtgaccattgcagccatgctg
tccgtgaatagcgccattttctacaggcccaaggacaaaatcattcacgcggacacagcc
cgaaaaaacttcaatcacatgcacggcgaccacttgagcctcctgcaggtctacaatcag
tgggcggagacggactacagcacccagtggtgctacgagaacttcatccagtacagatcg
atgaagcgggctcgcgacgtgcgggagcagctggtgggactgatgcagcgtgtcgagatc
gacatggtcagctgcctgccagaaacagtaaacgtgcgcaaggcagccaccgctggttac
ttttaccatgtggcgcgactctcgaagggcggtcactacaagaccatcaagcacaatcag
accgtgatgatacatccgaactcctcgctctttgaggagctgccgcgctgggtgctctat
cacgagctggtgttcacctccaaggagtacatgcgtcaggttatagagatcgagagcaag
tggttgctggaggtggctccgcactactacaaggccaaggagctggaggattcgacgaac
aagaagatgccaaaagtcgccgggcgagccgaaatggcgcaataa
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