Drosophila melanogaster (fruit fly): Dmel_CG1078
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Entry
Dmel_CG1078 CDS
T00030
Symbol
Fip1
Name
(RefSeq) factor interacting with poly(A) polymerase 1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Dmel_CG1078 (Fip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG1078 (Fip1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Dmel_CG1078 (Fip1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
FF
Motif
Other DBs
NCBI-GeneID:
40569
NCBI-ProteinID:
NP_649476
FlyBase:
FBgn0037255
UniProt:
Q9VN31
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All DBs
Position
3R:4485008..4487677
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AA seq
701 aa
AA seq
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MADDTNEDSWLYGTSNPDSTTGELGNGGDSLTAEHESAAAEAQALAELVAGEKPGASAGT
NSTEDSPRCPKEEVPEYSEFDDPAQEMEEDEDALPNTDSRSRRERDRERDRGRCADRADA
RSSPDPEDDEMSDGPAARRERNGSGSDDDEDDDSDDDINVVIGDIKQAPSTYNIKQRPNL
LAGGTGAAGDKAKPAGQAGKFSIEDFEGAGTINGVAVHEFSIDSLEEKPWRKPGADITDY
FNYGFNEETWRAYCERQKRFRVAESGVGLASLTQNVNQNAPIGILTDGGMGMGPPGMHSI
QSMVGMGGESGMQMPPPGMPPPMMQHQSRSGMGLMQRPPRPISTTGGDRGGDRERAVKEN
AIQVMTAECREYSRGGLGPMAPNFPLPGASEEPFFHEPEPFDYGYEPTQESQWNNDNAGW
VPSGIKELTPGHAHMQQPPPGMPPPGMSVPPPQMGGPPPNLRGIMPPNMRMPPNMNMGPP
PGMMMGGNAPPQMRMGMAPPQRLAMGDRGAYDDDRERRRREKEKLLKKDQLRKDFLDMLR
ERHDIERHTRWYDIKKKFEADPRYRALDSSYREEYFEDYLHLLKEEKRKERDLKERERHR
DKERSRDKDKDKDKEKDKDKDKDKEKDKEKDKDKDKEKEKDKESSRRERSRSREKSSRRK
SKSREKDRSERSSKSSSSNTGGSSSRSEKKKSHRKDKEEDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacacaaatgaggacagctggctgtatggcacctcgaatcctgactcgacg
accggcgagctgggcaacggcggggattctctgacggcggagcacgagtcggcggcggct
gaggctcaggcattggccgaattggtggccggcgaaaagccgggcgcttcggccggaact
aactccactgaagactcgccgcgctgtccaaaggaggaggtgcccgagtactcggagttc
gacgatcccgcgcaggaaatggaggaggacgaggatgccttgcccaacacggacagcagg
agcaggagggagcgcgaccgagaacgggatcgtggtcggtgcgcggacagggccgacgcc
cgatcatcgccagacccagaggacgacgagatgagcgatggtcctgccgcgaggagagaa
aggaacggctcagggtccgatgatgatgaagacgacgactctgacgacgatatcaacgtg
gttatcggagacattaaacaggcccccagcacctacaacatcaagcagcgacccaacctg
ctggctggaggcactggtgctgccggagacaaggccaagccggctggtcaggcagggaag
tttagcatcgaggacttcgaaggtgccggcaccatcaacggagtggccgtgcacgagttc
agtatcgattcgcttgaggagaagccgtggcgaaagccgggagcggatattaccgactac
ttcaactatggctttaacgaagagacgtggcgcgcctattgcgagcgccagaaacgcttc
cgcgtggcggagagtggtgtcggactggccagcctcactcagaatgtgaatcagaatgcc
cccattggaatcctcacagatggcggtatgggcatgggccctcccggaatgcacagtatc
cagtccatggtgggaatgggcggtgaaagcggcatgcaaatgcccccgccgggaatgccg
ccgcctatgatgcaacaccagtcgcgatccgggatgggattgatgcagcgcccgccaaga
cccatctcaaccacaggcggcgataggggaggtgaccgggagagagccgttaaggagaac
gccattcaggtgatgaccgccgagtgccgcgagtattctcgtgggggattgggacccatg
gcgccaaacttcccgctacccggcgcctctgaggaacccttcttccacgagccagaaccc
tttgactacggctatgagcccacccaagagtcgcagtggaacaatgacaatgccggatgg
gtacccagcgggattaaagagcttactcctggtcatgctcatatgcaacaacctccgcct
ggcatgccgcctcctgggatgagtgtgccaccgccgcagatgggcggtccaccacccaat
ttgcgcggcattatgccacccaacatgcgcatgccgccaaatatgaacatgggaccgcca
ccaggaatgatgatgggaggaaatgccccgccacagatgcgaatgggtatggcaccgcca
cagagattggccatgggcgatcgtggcgcctacgacgacgatcgtgagcgcaggaggcgc
gagaaggaaaaactgttgaagaaagatcagctgagaaaggacttccttgacatgctgcgg
gagcgacatgacatcgaaaggcacaccaggtggtacgatattaagaaaaagtttgaggcg
gatccaaggtaccgagccctggactcgtcctatcgtgaggagtacttcgaagactatttg
cacctgctgaaggaagagaagcgcaaggaacgtgacctaaaggaacgtgaacgacatcgc
gacaaagagcggtctcgtgacaaggacaaggataaagataaagaaaaggacaaagataaa
gataaggataaggaaaaagataaagagaaggataaggacaaagataaggagaaggaaaag
gataaagagagctcccgtcgggagcgctctcgatctcgcgaaaagtccagccgtcgcaag
tccaagtcccgtgagaaagatcgaagcgaacgaagcagcaagagtagcagcagcaatacc
ggaggatcctccagtcgtagcgaaaagaaaaaatcgcatcgcaaggacaaagaagaggac
gactag
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