Drosophila melanogaster (fruit fly): Dmel_CG11115
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Entry
Dmel_CG11115 CDS
T00030
Symbol
Ssl1
Name
(RefSeq) suppressor of stem-loop mutation, isoform B
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03022
Basal transcription factors
dme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Dmel_CG11115 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
Dmel_CG11115 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dme03021
]
Dmel_CG11115 (Ssl1)
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG11115 (Ssl1)
Transcription machinery [BR:
dme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Dmel_CG11115 (Ssl1)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Dmel_CG11115 (Ssl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
40509
NCBI-ProteinID:
NP_001262227
FlyBase:
FBgn0037202
UniProt:
Q9VNP8
Q7K5K2
LinkDB
All DBs
Position
3L:22879089..22880963
Genome browser
AA seq
438 aa
AA seq
DB search
MADDEQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKSKQNRLGM
MRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKV
TELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTC
DPVDINLTIDELKKEGIRCSVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVD
PPPAAKTQHNSLIRMGFPHTKNEVEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSK
YCELPVECQSCGLTLVSAPHLARSYHHLFPVPNFEELPFEAMPASSSDLTSDVRECYGCA
KALGQGVDKVADKVVFRCGFCKQFFCVDCDIFIHDTLHACVGCNTIPGVDGLVYQQSSKS
DQVDAHPGPSKQRGQCGM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatgagcaagaggaccagaaggagtaccgctgggaaacgggctatgaaaag
acatgggaggccatcaaggacgacgaggatgggatgctggatggagccattgcagagatc
attcagaaggccaaacgccagaggcaggctcaaaagtccaagcagaaccgcctgggcatg
atgcgccacatgttcgttgtgctcgattgctctgagtccatgagcgtgcctgatttgaaa
cccacacgactgcggtgcaccgtcaagctgctggagctgtttatcgaggagttcttcgat
cagaaccccatcagccaattaggactcatagcgctaaaagctaagcgagcggagaaggtg
accgaacttaccggcacttcgcgcgtgcacctcaaagcgctagagagcttggctaacgtg
tccttgaccagcgagccttcgctgcaaaatggcctagatctggccctaaaatcgcttaag
gtggtgccgtcgcacgcctcccgagagatcgtcattatcatgggctcgctcaccacatgt
gatcctgtcgatattaacctcaccatcgacgagttaaaaaaggagggcatacgctgctcg
gttatttccctgtccgctgagattcacgtggcccgctacctcactcagcaaacaatgggc
accttcggggctgttttggatgatgcacattttcgggatcaactcatgtctcaggtagat
ccaccgcccgccgctaagactcagcacaactcgcttattcgcatgggcttcccgcacaca
aagaatgaagttgagggcaaggacgcgccattgtccatgtgcatgtgccacatagagaac
ttggaggagcccagtgaactgaccactactggccaccactgcccgcaatgcaacagcaag
tactgcgagctgcccgtggagtgccagtcttgcggcctcaccctggtctccgcgccgcac
ttggcgcgttcctaccaccaccttttcccggtgccaaattttgaggaactgccgtttgag
gcgatgcctgcttcgtcatccgacctcaccagcgatgtcagggaatgttacggctgcgcc
aaagctcttgggcaaggcgttgacaaggtcgccgataaagtcgtcttcagatgcggtttc
tgcaagcagttcttctgcgttgactgcgacatcttcattcacgacacattgcacgcctgc
gtgggatgcaacaccattcccggcgtagacggtctggtttaccagcaaagttccaagtct
gaccaggttgatgcacacccagggccctcaaagcagcgcggccagtgtgggatgtaa
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