Drosophila melanogaster (fruit fly): Dmel_CG11184
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Entry
Dmel_CG11184 CDS
T00030
Symbol
Upf3
Name
(RefSeq) Upf3, isoform D
KO
K14328
regulator of nonsense transcripts 3
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03013
Nucleocytoplasmic transport
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Dmel_CG11184 (Upf3)
03015 mRNA surveillance pathway
Dmel_CG11184 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG11184 (Upf3)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Dmel_CG11184 (Upf3)
mRNA cycle factors
P-body specific factors
Dmel_CG11184 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
37792
NCBI-ProteinID:
NP_611844
FlyBase:
FBgn0034923
UniProt:
Q9W1H3
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Position
2R
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AA seq
492 aa
AA seq
DB search
MAETFAEEKPKEKSKASRRKDKKDKTNQIVKIVMRHLPPTMTEAQFLDQVGPLPENDSYY
YCKADWSLGQEATCRAYIDMSSKDIGEVVQFRDRFDGYVFVDHKGVEYMAIVEYAPFQCF
LKNKARNDDSKVNTIESEPHYQEFIKRLAQEREEASRMGDVKIDFNFERRTEEKVKSTPL
LQYLANKKEKRREEARRRNEEKRKQREEQKLLRLAAQSDASKLKEAEGGGGGGDTKKPAK
KDVKDPQSSGSQANDAKASRSKRRTERDQRRREEHEQRKLVKRDKKKDDGQGKQDKQDKQ
DKGKPSSGKQNKNSKSMDIVILKKANKPESNESLDVPSTSNAAEASKEKPATENTETPEA
AVKVFTPAARGGRKEKRTGADKQPAGSAHETAEEAIKAAQFRASEERRIRNKDRPSIAIY
QPKARIRASDELPQGAGGKDGSDGEASVVEEKTSKRNKRPNRRNKPKPKEVKECELETRR
FSKSSESSTSVK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacttttgccgaggaaaagcccaaggagaagtccaaggcaagcaggcgcaag
gacaagaaggacaagaccaatcagatcgttaagattgtgatgcggcatttgccgccgacc
atgacggaggcgcagttcctggatcaggtgggtcctttgccggagaacgactcgtattac
tactgcaaggcagactggtcgctgggccaggaggccacctgtcgcgcctacatcgatatg
tcctccaaggacataggcgaggtggtgcagttccgggatcgcttcgacggctacgtcttc
gtcgaccacaagggcgtcgagtacatggccatcgtggagtatgctcccttccagtgcttc
cttaagaacaaggccaggaacgacgacagcaaggtgaacaccatcgagagcgaaccccac
taccaggagttcatcaagcggctggcccaagagcgcgaggaggcgagtcgcatgggcgac
gtcaagatcgacttcaacttcgaacggcgaacagaagagaaggtcaagtctacacccctc
ctgcagtacctggccaacaagaaggagaagcgccgggaggaggcgcgcaggcggaacgag
gagaagcggaagcaacgcgaggagcagaagctgttgcgattggcagcgcagtcggacgcc
agcaagcttaaggaggccgaaggaggcggcggaggaggagacacgaagaagccagccaaa
aaggatgtcaaagatccgcagtcatctggatcccaagccaatgatgccaaggcctcgcgc
tccaaacgacgaacggagcgggatcagaggcgacgcgaggaacacgaacagcgtaagcta
gtcaagcgggacaagaaaaaggatgacggccagggcaagcaggacaaacaggacaaacag
gacaaaggcaagccatccagcggcaagcagaacaaaaattcaaagtccatggacatcgtt
atcttgaagaaagcaaacaagccagaatcaaacgagagtttggacgtgccatccacttct
aacgctgcggaggcctcgaaagaaaagcctgcgactgaaaacaccgagacaccagaagct
gctgtcaaggtttttacaccggctgccagaggtggtcgcaaggaaaaaagaaccggcgca
gacaagcagccagcaggttccgcccacgaaactgcagaggaagccatcaaggctgctcaa
tttcgagcttcagaggagcggcgcattcggaataaagatcgaccatcgattgccatttac
cagcccaaagcccgaattcgtgcatcagatgagctgccccaaggtgcaggcggcaaagat
ggctcggatggagaggcttccgtggtggaggagaagacttcgaagaggaacaaacgcccc
aatcggcgcaacaaacccaaaccgaaggaggtgaaggagtgtgagctcgaaactcgtcgc
ttctccaaatcctccgagagcagcaccagcgtcaaatag
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