Drosophila melanogaster (fruit fly): Dmel_CG11265
Help
Entry
Dmel_CG11265 CDS
T00030
Symbol
Trf4-1
Name
(RefSeq) topoisomerase related function 4-1, isoform J
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG11265 (Trf4-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG11265 (Trf4-1)
03016 Transfer RNA biogenesis [BR:
dme03016
]
Dmel_CG11265 (Trf4-1)
Enzymes [BR:
dme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dmel_CG11265 (Trf4-1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Dmel_CG11265 (Trf4-1)
Transfer RNA biogenesis [BR:
dme03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Dmel_CG11265 (Trf4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
31795
NCBI-ProteinID:
NP_001259340
FlyBase:
FBgn0030049
UniProt:
Q7KVS9
LinkDB
All DBs
Position
X:8560322..8570159
Genome browser
AA seq
1001 aa
AA seq
DB search
MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQATTINGSTSSSSSSSNSGN
NNNNNNNNIINNTITNTTNNTGNNSSAKPYLSRPYSSLNRVLNFRADSLEILQQQQQQQQ
LNGTTQRNSTNINTTSGGSTSSSADSTTNRDNNSPANSSSTNGPGAGTGTSTGAGGTGTN
SPATTASSTAATTTGPATSMSDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAHY
YMNNHMEMIAKYKGEPWRKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIE
AVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELVSRGIAEACTV
RVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFLL
LRDLNEVFTGGISSYSLILMCISFLQMHPRGIYHDTANLGVLLLEFFELYGRRFNYMKIG
ISIKNGGRYMPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRV
LALAVSPLNLLGIDPRVNSILGRIIHITDDVIDYREWIRENFEHLVVVDRISPLPTAAPT
AYATANGAPKYVIMPSGAVVQQLYHHPVQVPTAHGHSHAHSHSHGHAHPGAHLCQPYVTG
TTVSAVTTTTTMAVVTVGVSAGGVQQQQQQQNATAHTHSQQQTQNQSQSRHRRGSTSSGD
DSEDSKDGDVVETTSSAQEVVDIALSTPNGLANMSMPMPVHAVGMPASNSWSGNGNGNGN
SSSSTGSSPEIAHIAAQEMDPELEDQQQQQQHQETSGGNGFIRPGDVGTGSNRGGGDGSG
GRNYNQRNNHNSSGYYHQQYYVPPPMQQQLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHH
QQQHHHQQRPQHLRVGGGNRYQKSLGGSPIISAGNASNSSSNCSNSSSSSGSNNSRLPPL
RGTLVNSSSAISIISISSESSIASSSSSSSRSGQDQQRDER
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttgttggctggtttcagaaggaacaggagggaccatcgctgtgcacatgg
ttaaagatttgggagacgaatgcccaagagatgggcgcattgcttaatcaacagctacag
caggcgacgacgatcaacgggagcacgagcagcagcagcagcagcagcaatagtggtaac
aacaacaacaacaacaacaataacatcatcaataacactatcaccaacacgaccaataac
actggtaacaattcatcggccaaaccctacttatcgcgaccctacagctcgctaaatcgg
gtgctcaatttccgagcggattccctggagatcctgcagcagcaacaacaacagcagcag
ctcaacgggaccactcagcgcaacagcaccaacatcaataccacaagcggcggcagcact
agctcgtcggcagattccaccacgaatcgggacaataactcacccgccaatagcagttca
accaacggacccggagcaggaacgggaacgtcaacaggagcaggaggtaccggtacaaat
agtccggcgacgacagcgtcaagcacagctgcgaccacgactggtccagccactagtatg
agcgacaccagcaacaacccgccacaatcaacgaccacgcccgccagccgcacgaacagc
atctactacaatccatcgcggaagaaacgaccggagaacaaggctggcggagcccactac
tatatgaacaaccatatggagatgatcgccaagtacaagggcgaaccgtggcgcaagccg
gactatccgtatggcgagggcgttatcgggctgcacgaggagatcgagcatttctatcag
tacgtcctgcccacgccctgcgaacacgccatccgcaacgaggtggtcaagcgtatcgag
gccgttgtccattccatctggccacaggcagtagtcgagatctttggctcctttcgcact
ggcctctttttgcccacctccgacatagatctcgttgtgttaggtttgtgggagaagctg
ccgctgagaacgctggagttcgagctagtgagccgtggtatcgccgaggcttgtacggtg
cgtgttctggacaaggcatcagtgcccatcatcaagctgacggaccgggaaacgcaagtg
aaggtagacatatcgttcaacatgcagagtggtgttcagtcggcggagctgattaagaag
tttaagcgcgactatccagtgctggagaagctagtgcttgtgctgaagcagttcttacta
cttcgcgatctcaacgaggtgttcacgggcggcatctcctcctactcgctgatccttatg
tgcatcagcttcctgcagatgcatccgcgcggtatctaccacgatacagccaatctgggg
gtgcttctcctcgagttcttcgaactttatggacgtcgcttcaactacatgaagatcggc
atctccataaagaacggtggccgctacatgcccaaggatgagctgcagcgtgacatggtc
gatggccatcgaccctcgctcctgtgcatcgaggatccgctgacgccaggcaatgatatc
ggtcgaagcagctacggcgtcttccaggtgcaacaggcattcaagtgcgcctaccgcgtg
ctcgcccttgccgtcagtccgctcaaccttctcggcatcgatccgcgcgtcaactcgata
ctgggtcgaatcattcacatcaccgacgacgtgatcgattatcgcgaatggatccgcgag
aacttcgaacatctggtggtggtggatcgtatctcgccgctgcccactgccgctcccact
gcgtacgccaccgccaatggggcgccaaaatatgtgattatgccctcgggcgccgttgtc
cagcagctgtaccatcatccggtgcaggtgcccaccgctcacgggcacagccatgcgcac
agccacagtcacgggcacgcgcatcctggcgcccatctgtgccagccgtatgtgaccggg
accactgtatctgctgtaacgacgactacaacgatggcggtggtgaccgtgggcgtgtca
gccggcggagtccaacagcagcaacagcaacagaatgcgacggcccatacccactcgcaa
cagcagacacagaaccaatcgcagtcgcgccatagacgcggcagcacctcgtcgggcgat
gactccgaggatagcaaggacggcgatgttgtcgagacgacgtcgagtgctcaggaggtc
gttgacatcgcgctatcgacgccaaatggcctggccaacatgtccatgcccatgccagtg
catgctgtcggaatgcctgcgtcgaacagttggagcggtaatggcaatggaaacggaaac
agcagctcatccacgggctcgtcgccggaaatcgcacacatcgctgcccaggaaatggac
cccgagcttgaggatcaacagcaacaacagcagcaccaagagacttctggaggtaatggc
ttcatccgaccgggtgacgtcggcaccggttccaacaggggaggcggtgacggcagtggc
ggccgcaattacaaccagcggaacaaccacaactccagcggctactaccaccagcagtac
tacgtgccaccgccgatgcaacagcagctgagcaagtccaactcctcctccaactatcac
cagcaacaccatcacagccacagccatggcaatcatagtcaccgacaacagcatcaccac
cagcagcagcaccaccaccagcagcggccgcagcatctgcgtgtgggcggcggcaatcga
taccagaaatcgttgggcggatcgcccatcatcagtgctggcaatgcgtcgaacagcagc
agtaattgcagcaacagcagcagcagcagcggcagcaacaacagccgactgccgccgcta
aggggcacgctggtcaactcatcgtcagcaatatcaatcatttccatatcctcagaatca
tccattgctagcagcagctccagttcgtcaagatccggtcaggatcagcagcgtgacgag
cgatag
DBGET
integrated database retrieval system
