Drosophila melanogaster (fruit fly): Dmel_CG13900
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Entry
Dmel_CG13900 CDS
T00030
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3b subunit 3, isoform A
KO
K12830
splicing factor 3B subunit 3
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmel_CG13900 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dme03021
]
Dmel_CG13900 (Sf3b3)
03041 Spliceosome [BR:
dme03041
]
Dmel_CG13900 (Sf3b3)
03036 Chromosome and associated proteins [BR:
dme03036
]
Dmel_CG13900 (Sf3b3)
Transcription machinery [BR:
dme03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
Dmel_CG13900 (Sf3b3)
Spliceosome [BR:
dme03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
Dmel_CG13900 (Sf3b3)
Complex B
Dmel_CG13900 (Sf3b3)
Complex C
U2 SnRNP specific factors
Dmel_CG13900 (Sf3b3)
Chromosome and associated proteins [BR:
dme03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
Dmel_CG13900 (Sf3b3)
TFTC complex
Dmel_CG13900 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
38093
NCBI-ProteinID:
NP_728546
FlyBase:
FBgn0035162
UniProt:
Q9W0M7
LinkDB
All DBs
Position
3L
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG
CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADLANEDT
PQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQ
RSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDA
PAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA
VLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG
AVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEE
RELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSM
AMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPG
ALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF
FIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDP
TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFV
PFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQ
KSIAGDMFRTPNQICKKLEDIRTRYAF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaacctgaccctgcagaaggccaccggcgtgacccacgcggtccacggc
aacttctccggcggcaagcagcaggaggtcctcctgtcgcgtggcaagtcgctggagcta
ctgcgtccggactccaacaccggcaaggtgcacaccctgctctccacggagatattcgga
tgcgttcgcgccctgatggcctttcgactgacgggcggcactaaagattacatagttgtg
ggctcggactcgggacgcatcgtgatcctcgagtacaatccctccaagaatgctcttgaa
aaagtgcaccaggagacgttcggaaagtcgggatgtcgcaggattgtgcctgggcaatac
tttgccatcgatcctaaaggaagagccgtgatgattggcgccgtggagaagcaaaagctg
gcctacatcatgaaccgggacacgcaggctcgcctcacgatctcatcgcccctggaggcc
cacaaatcgaatacactgacataccacatggtcggcgtggatgtgggcttcgataatccc
atgttcgcctgcctagagatcgactacgaagaggccgacatggatccatcgggtgacgcc
gcccagcgcactcagcaaacgctgactttctacgagttggatctcggcttaaaccacgtg
gttcgcaaatactcggagcccttggaagagcacgccaatttcttggtatccgtgcctggg
ggcaacgatggtccttcgggcgtgctgatctgctcggagaactacctaacgtacaagaat
ctcggcgatcagcacgatatccgctgtcccattccgcgcaggagaaacgatctggatgat
cccgaacgtggtatgatcttcatctgctcggccacacatcgcaccaagagcatgtacttc
ttcctgctgcagaccgagcagggagacatctttaagatcaccctggaaacggacgatgat
gtggtctccgagatcaagctaaagtacttcgatacagtgccgccggcaactgccatgtgc
gtgctaaagacgggtttcctgttcgtggccagcgagtttggcaaccactatctatatcaa
atcgctcatctgggtgacgacgatgacgagccggagttcagttcggccatgcctttggag
gagggtgaaaccttcttctttgcgccacgtgccctaaagaacctggtgcttgtggatgaa
ctgccctctttcgcaccgatcatcacctcccaggtggctgatctggccaacgaggacaca
ccgcaactgtacgttctttgcggacgaggaccgcgttccactctgcgggtgctgcgccac
ggcctcgaggtgtccgagatggccgtttccgaactgcctggtaatcccaatgcggtttgg
actgtgaagaaacgagctgatgacgagtttgatgcctatatcatcgtgtccttcgtgaat
gccaccctggttttgagcattggcgaaaccgtcgaggaagtcacggacagcggtttcctg
ggcaccacgcccacgctctgttgtgccgccctgggcgatgatgcgctggttcaggtttac
cccgatggcattcgacatatccgatccgacaagcgtgtgaacgagtggaaggctccgggc
aagaagtccattaccaagtgcgccgtgaatcagcgccaggtggtcatcaccttgtcgggc
agggagttggtctacttcgaaatggatccgactggggagctgaacgagtacacggaacgt
tccgagatgcctgctgagattatgtgcatggccttgggaactgttccggagggcgagcag
agatcctggttcttggccgtcggcctggcggataatacagtgcgcatcttatcgctggat
cccaacaactgtctcactccctgctccatgcaggccctgccttcgccagccgaatccctt
tgcctggtcgaaatgggtcacacggagagcacgactcagggaggtttggatgacgatgct
cccgctcagcgcagtggcaacaataagggaaccatttacctaaacattggcttgagcaac
ggtgtcctgctgagaactgtgctcgatcctgtttccggagatttggcagacacccgaacg
agatatttgggttcccgacccgtaaagctcttccggatcaagatgcagggatccgaagcg
gtgctggccatgtccagtcgaacctggctgtcgtactaccaccaaaatcgattccatttg
acgcctctgtcttatgaaacccttgagtatgcttctggcttctcgagcgagcagtgcagc
gaaggtatcgtggctatatccaccaacaccttgaggatcttggccctggagaaactggga
gccgtcttcaatcaagtagcgttccccttgcagtacactccacgtacctttgtaatccat
ccggatacgggacgcatgctaattgccgaaaccgatcacaacgcctacacagaggatacg
aagagtgcccgaaaggagcaaatggcggaggagatgcgcagtgcagctggcgatgaggaa
agggagttggcccgcgaaatggccaatgctttcatcaacgaagtccttcccgaggacgtg
ttttcgtcgcccaaagcaggactgggtctttgggcctcgcaaatccgttgcctggacgca
atgcatggtcagacgatgtttagtgtgccgctcacccaaaacgaggccattatgtcgatg
gccatgctgaagttctccatagcggctgatggccggtactacctggccgtgggaatcgcc
aaggatctgcagctgaatcccaggatttcgcaaggcggctgcatagatatctacaaaata
gatcccacttgctccagtctggaattcatgcaccgcacggacattgacgagattcctgga
gccctgtgtggcttccagggtcgtctactagctggctgcggtcgaatgttgcgaatctac
gatttcggcaagaagaaaatgctgcgcaaatgcgagaacaagcacattccctatcagatt
gtcaatatccaagccatgggtcatcgtgtttacgtgtcggatgttcaggaatcagtattt
ttcatacgctatcgtcgcgcggagaaccagctgattatatttgccgatgacacgcatcct
cgatgggtgacggccaccaccttgctggactatgataccatagccatagccgataagttt
ggcaacctgagcattcagcgattgccccactccgtaacggacgatgtggacgaggatcca
acgggcaccaagtctctgtgggatcgtggcctgctgtcaggtgcttcacagaagtcggag
aacatttgctccttccatgtgggcgagataatcatgtcgctgcagaaggcaacgctaatt
cctggaggatcggaagcccttatatacgccacgctaagtggcactgttggagcatttgtt
ccgttcaccagtcgcgaggactacgacttcttccaacatctggagatgcacatgcgcaat
gagaatcctccactctgtggacgcgaccatctcagctacaggagctcgtattatccggtc
aaaaacgtactcgacggcgatctctgcgagcagtatctgtccattgaggcagccaagcag
aagagcatagctggcgacatgttccgcactcccaatcagatctgcaagaaactggaggat
attcgcacgcgatacgccttctaa
DBGET
integrated database retrieval system
