KEGG   Drosophila melanogaster (fruit fly): Dmel_CG14999
Entry
Dmel_CG14999      CDS       T00030                                 
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03030  DNA replication
dme03410  Base excision repair
dme03420  Nucleotide excision repair
dme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dmel_CG14999 (RfC4)
   03410 Base excision repair
    Dmel_CG14999 (RfC4)
   03420 Nucleotide excision repair
    Dmel_CG14999 (RfC4)
   03430 Mismatch repair
    Dmel_CG14999 (RfC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dme03032]
    Dmel_CG14999 (RfC4)
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG14999 (RfC4)
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG14999 (RfC4)
DNA replication proteins [BR:dme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Dmel_CG14999 (RfC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    Dmel_CG14999 (RfC4)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Dmel_CG14999 (RfC4)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Dmel_CG14999 (RfC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    Dmel_CG14999 (RfC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 Mg_chelatase AAA_16 Viral_helicase1 Rad17 nSTAND3 AAA_18 AAA_19 MeaB AAA_24 AAA_5 AAA_11 RuvB_N ABC_tran MnmE_helical RNA_helicase NTPase_1 AAA_assoc_2 DEAD AAA_2 AAA_23 AAA_28 AAA_3 AAA_7 AAA_30 MCM SRP54 AAA_29 bpMoxR IstB_IS21 KTI12 FtsK_SpoIIIE T2SSE DUF815 ATPase_2 AAA_33 ATP_bind_1 cobW CbiA
Other DBs
NCBI-GeneID: 38492
NCBI-ProteinID: NP_523915
FlyBase: FBgn0260985
UniProt: P53034
LinkDB
Position
3L
AA seq 331 aa
MPEEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGV
GKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLA
KLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHP
KLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREI
GITHMKIIDGINSLLQLTALLAKLCIAAEKH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccggaagaaccagagaaaacggcggacgacaagcgcagtcacttgccgtggattgag
aagtaccgccccgtgaagttcaaggagatagtgggcaatgaggataccgtagcaagacta
tccgtattcgccacccagggaaatgcacccaatattattattgctggtcctcctggcgtg
ggcaagacaaccaccatccagtgtctggccaggattctcctgggagacagctacaaggag
gctgtcctcgagctgaatgcctccaatgaacgaggaatcgatgtggtccgcaacaagatc
aagatgtttgctcagcagaaggtgacactgccgcggggcaggcacaagattgtgattctg
gacgaggcggacagcatgacggagggtgcccagcaggcactgcgccggaccatggagatc
tacagcagcaccactcgttttgccctggcctgcaacaccagcgagaagatcatagagcct
atccagtcccgctgcgccatgctacgattcaccaagctgtccgatgcgcaagttctggcc
aagctcatcgaggtggccaagtgggagaagcttaactacacggaggacggacttgaggcc
atcgtattcactgcccaaggtgatatgcgacagggactgaacaacctgcagtccaccgct
cagggatttggcgacatcaccgctgagaacgtctttaaggtctgcgacgagccgcaccca
aagctcctagaggagatgatccaccattgcgctgctaacgacatacacaaggcctacaaa
atcctggccaagctgtggaagctgggatactcgccggaggacatcattgcgaacatattc
cgtgtctgcaagcgcatcaacatcgatgagcatttgaagctggactttatccgtgagatc
ggaatcacccacatgaagattatcgatggtatcaactcgctgctgcagctcaccgccctt
ctggccaaactctgcattgccgccgagaagcattag

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