Drosophila melanogaster (fruit fly): Dmel_CG15481
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Entry
Dmel_CG15481 CDS
T00030
Symbol
Ski6
Name
(RefSeq) Ski6, isoform B
KO
K11600
exosome complex component RRP41
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG15481 (Ski6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG15481 (Ski6)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Dmel_CG15481 (Ski6)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Dmel_CG15481 (Ski6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
34721
NCBI-ProteinID:
NP_001260437
FlyBase:
FBgn0032487
UniProt:
Q9VK19
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All DBs
Position
2L
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AA seq
246 aa
AA seq
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MSGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK
GNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIY
VEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGP
KLTVAALPTAEKIAFLEMSERFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSAS
DFAKVG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaaatacgatctgctcagtgagcagggcctccgtctggacggacgacgtcct
catgaattgcgccgcatcaagtgcaaactgggagtcttcgagcagcccgatggaagtgcc
tacatggagcagggaaacaccaaggttctggctgccgtctatggaccccaccaggccaag
ggcaatcagacagagtccgtcatcaactgtcagtacagtcaggcaaccttctccacggcg
gagcgcaaaaataggccgcgcggcgatcgcaaatctctggagttcaagttgtacctgcag
caggcgctaagtgctgccattaaatcagaactatatccccgctcccagatagacatatac
gtggaggtgctccaagacgacggcgccaactatgcggtggctcttaatgccgccacactg
gcgctaattgatgcgggaatctgcctcaatgagttcattgtcgcctgcaccgcctcactg
agcaaatcgaacatcccgctcacagacatctctcagttcgaggaggtatccggcggaccg
aaactaaccgtggctgccttgcctaccgccgagaaaatcgcctttcttgagatgagtgag
cggttccacatcgatcacttggaaaccgtcatcgagactgctatggcgggttgccgcgaa
ataagggacattctggaggcagcagtcaaggagcaccttctgcacatgggcagtgcctct
gactttgcgaaagttggttga
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integrated database retrieval system
