Drosophila melanogaster (fruit fly): Dmel_CG16788
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Entry
Dmel_CG16788 CDS
T00030
Symbol
RnpS1
Name
(RefSeq) RNA-binding protein S1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03013
Nucleocytoplasmic transport
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Dmel_CG16788 (RnpS1)
03015 mRNA surveillance pathway
Dmel_CG16788 (RnpS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG16788 (RnpS1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Dmel_CG16788 (RnpS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
41147
NCBI-ProteinID:
NP_649903
FlyBase:
FBgn0037707
UniProt:
Q9VHC0
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All DBs
Position
3R
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AA seq
374 aa
AA seq
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MARAQSLAGEGEKEKDNKEKVAKEKDGKATSGSSRRDRERKRRGSASSSSDSRSSTSDSS
SSRSSSGSSRSSSSSSSDSSSSSSSSSSDSDRSEKNRRRGGGAAGKDKDKDKPSARSRSR
SRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDRARRAGSNDRAAADSNNVKRERSRS
ASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFS
SFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVK
QRPPMRRPSPPMRRPQNNRWRSPPQFNRFNNRGGGGGGGGGRRQSPMRNRRSPRRRSRSP
IRRRRRSNSSDSSR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcccagagtctcgccggcgagggtgagaaggaaaaggacaacaaggagaag
gtcgccaaagagaaggacggcaaggcgaccagcggctcctcgcgcagggaccgcgaacgc
aaacgccgcggatcggcgtcctccagcagcgactccagaagcagcacatcggacagcagc
tcttcgcggagcagttccgggtcatcgcgttccagctcaagcagctccagcgactcctcg
agctcctcatcatcgtcgtccagcgattcggatcgcagcgagaagaaccgaagacgtggc
ggcggcgctgctggcaaagacaaagacaaggataagcccagcgcccgatcacgttcccgc
tctcgcacccgttcccccaggcgtgtctccaaatctccaagaccgggcagcaaggcgcga
aaagagccggagcgagatcgcgatcgtcgtagtcggtcgagggatcgtgcccgccgtgct
ggatccaacgatagggcagccgccgatagcaataatgttaagcgggagcgttctcgctca
gccagtcgttcacgatcgccacgccgtcgtggtcgcggctccgttgagaggacgccgcca
ccgaagcgaagggagcgctcccgttcgcggactcgctcgccttcgcccaaacaggtgcgc
attcatgtcggtcggcttacccgcaacgttaccaaggaccatgtgttcgagatatttagc
agctttggggatgtgaagaatgtggagtttcccgtagatcgttttcatcctaacttcgga
cgcggcgtggcgtttgtggaatatgccacacccgaggattgtgagtcggccatgaagcat
atggatggcgggcagatagatggccaggagattacggtatccccggttgtcttagtaaaa
cagaggccgcccatgcgtcgtccttcgccaccgatgcgccgtccgcaaaacaaccgctgg
cgatccccaccccagttcaataggttcaacaatcgtggaggaggtggtggcggcggcggc
ggacgtcgtcagtcacccatgaggaaccggcgttcaccacggcgtcgctcccgctccccc
attcgtcgtcgacgccgcagcaatagcagtgacagctctcgttag
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