KEGG   Drosophila melanogaster (fruit fly): Dmel_CG16788
Entry
Dmel_CG16788      CDS       T00030                                 
Symbol
RnpS1
Name
(RefSeq) RNA-binding protein S1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG16788 (RnpS1)
   03015 mRNA surveillance pathway
    Dmel_CG16788 (RnpS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG16788 (RnpS1)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Dmel_CG16788 (RnpS1)
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 41147
NCBI-ProteinID: NP_649903
FlyBase: FBgn0037707
UniProt: Q9VHC0
LinkDB
Position
3R
AA seq 374 aa
MARAQSLAGEGEKEKDNKEKVAKEKDGKATSGSSRRDRERKRRGSASSSSDSRSSTSDSS
SSRSSSGSSRSSSSSSSDSSSSSSSSSSDSDRSEKNRRRGGGAAGKDKDKDKPSARSRSR
SRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDRARRAGSNDRAAADSNNVKRERSRS
ASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFS
SFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVK
QRPPMRRPSPPMRRPQNNRWRSPPQFNRFNNRGGGGGGGGGRRQSPMRNRRSPRRRSRSP
IRRRRRSNSSDSSR
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggcgcgtgcccagagtctcgccggcgagggtgagaaggaaaaggacaacaaggagaag
gtcgccaaagagaaggacggcaaggcgaccagcggctcctcgcgcagggaccgcgaacgc
aaacgccgcggatcggcgtcctccagcagcgactccagaagcagcacatcggacagcagc
tcttcgcggagcagttccgggtcatcgcgttccagctcaagcagctccagcgactcctcg
agctcctcatcatcgtcgtccagcgattcggatcgcagcgagaagaaccgaagacgtggc
ggcggcgctgctggcaaagacaaagacaaggataagcccagcgcccgatcacgttcccgc
tctcgcacccgttcccccaggcgtgtctccaaatctccaagaccgggcagcaaggcgcga
aaagagccggagcgagatcgcgatcgtcgtagtcggtcgagggatcgtgcccgccgtgct
ggatccaacgatagggcagccgccgatagcaataatgttaagcgggagcgttctcgctca
gccagtcgttcacgatcgccacgccgtcgtggtcgcggctccgttgagaggacgccgcca
ccgaagcgaagggagcgctcccgttcgcggactcgctcgccttcgcccaaacaggtgcgc
attcatgtcggtcggcttacccgcaacgttaccaaggaccatgtgttcgagatatttagc
agctttggggatgtgaagaatgtggagtttcccgtagatcgttttcatcctaacttcgga
cgcggcgtggcgtttgtggaatatgccacacccgaggattgtgagtcggccatgaagcat
atggatggcgggcagatagatggccaggagattacggtatccccggttgtcttagtaaaa
cagaggccgcccatgcgtcgtccttcgccaccgatgcgccgtccgcaaaacaaccgctgg
cgatccccaccccagttcaataggttcaacaatcgtggaggaggtggtggcggcggcggc
ggacgtcgtcagtcacccatgaggaaccggcgttcaccacggcgtcgctcccgctccccc
attcgtcgtcgacgccgcagcaatagcagtgacagctctcgttag

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