KEGG   Drosophila melanogaster (fruit fly): Dmel_CG16941
Entry
Dmel_CG16941      CDS       T00030                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3a subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG16941 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG16941 (Sf3a1)
Spliceosome [BR:dme03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Dmel_CG16941 (Sf3a1)
 Complex B
    Dmel_CG16941 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    Dmel_CG16941 (Sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Zip
Other DBs
NCBI-GeneID: 42048
NCBI-ProteinID: NP_650583
FlyBase: FBgn0266917
UniProt: Q9VEP9
LinkDB
Position
3R
AA seq 784 aa
MATLDAEANEEQFGNDQPKSMSGPIIGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQN
ELGNPKFNFLNGGDPYHAYYRHKVNEFREGNDAGITALASMKQLAVTSAAQQRQQELLKQ
VVEQQFVPKEPPPEFEFIADPPSISALDLDIVKLTAQFVARNGRQFLTNLMSREQRNFQF
DFLRPQHSLFQYFTKLLEQYTKVLIPPKDLLGKLRSESAPGRSSMNQVLEQVKYRANWQR
HQEAQRRREEEKIERERVAYAQIDWHDFVVVETVDYQPFESGNFPPPTNPDEVGARVLME
ERLMDEEGDTEMQIESDDEGDSQANNLLDSGLKLSQMENRVGIQMKNVSSYGQPTGPKRD
NTQVQDMDEASSDEDTPTTKLQPSVAPMLPPTHDKVVVKKYDPKATQPKQAPMPTDEYLI
SPITGEKIPASKVSEHMRIGLLDPRWVEQRDKHTVEKINQDNVFAAGTAIEASLKQLAER
RTDIFGVGDEETVIGKKLGEEETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQIHK
VKGLLPDEEKEKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQHHQGGGGGHHGHHNPHH
HHPPHQQAPPHQSHHHHPPQQPQPVMQLMQLRPTMMQPPFGAGGGGYMNMQPGGIPQQIA
PAPPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSPVTIQVLVPNSDKSEWKLNGQMIAV
TMALSEPIANLKTKLQDETGMPPAKQKIFYEGMFFKDSNTMAFYNLVNGTTVHLQVKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggcaactttagacgcggaagccaacgaggagcagttcggcaatgatcagcccaagtcg
atgtcgggtccaatcattgggattatctatccgccgccggaagttagaaatatcgttgac
aagaccgccagttttgtggctcgcaatggaccggaattcgaggcgcgcatccgccaaaat
gagctgggcaatccaaagtttaacttcttaaatggcggagatccctaccacgcatactac
agacacaaggtcaacgagttccgcgagggcaatgatgccggtatcactgcccttgccagc
atgaagcagctggcggtgaccagtgccgcccaacagcgccagcaagagcttctcaagcaa
gtggtggagcagcagttcgtaccaaaggaacctccacctgaattcgagttcatagccgat
ccgccctccatttcggcgctggatttggacattgtgaagctaactgctcaatttgtggcc
cgtaacggccgacagtttctgaccaatcttatgagccgggagcagcgtaactttcagttt
gacttcctgcgaccccagcactcgctcttccagtactttaccaagttgctggagcagtat
accaaggtcttgatacctccaaaggatttgctgggcaaactgcgttccgagagcgcaccg
ggcaggagcagcatgaaccaggtgctggagcaggttaaatatcgggccaactggcagcgt
caccaagaagcacaacgccgccgtgaggaggagaagatcgaaagggagcgcgtggcctat
gcccaaatcgattggcatgactttgtggtggtggagacggtggactatcagccattcgaa
tcgggcaacttcccgccacccacgaatcccgacgaggtaggagcccgtgtgctaatggaa
gagcgtctaatggacgaagagggcgatacagaaatgcagatcgagtcggacgacgagggc
gactcccaggctaacaacctattggacagcggtctgaaactctcgcaaatggagaaccgt
gtgggtatacaaatgaagaacgtatcgtcgtatggccagccgactggccccaagagagac
aacacccaggtgcaagacatggacgaagcctctagtgatgaggacactccaaccactaag
ttgcagccatctgttgcgccaatgctgccgcccacccacgacaaagtggtggtcaagaaa
tacgatcctaaggcaacgcaaccgaagcaggcgccaatgcctacggatgagtatctcatc
tcgccgattacaggagagaaaataccggcttccaaggtctcggagcacatgcgcatcggt
ctattggatccacgctgggtggaacagcgagacaagcatactgtggagaaaatcaatcaa
gacaatgtgttcgccgcgggcactgccatcgaggcgagtctcaagcaactggctgagcgt
cgtacggatatctttggtgtgggcgacgaggagaccgtcattggtaagaagctcggcgaa
gaggagacgaagaaggacgatcgcgtcacctgggacggacacacgtccagcgtggaggcg
gccacgagagcagcacgtgcaaatatcactctggaggaacaaattcatcaaatccacaag
gttaagggactgctgcccgacgaggagaaggagaaaatcggccccaaaccggtgggcaac
aaggcgacgctttcagctccgccgcagccgtcaaccaagtcgcagcacagtcactccagc
cagagtcaacaccaccaaggtggcggaggtggtcaccacgggcatcataatcctcatcat
caccatccaccgcatcagcaggcgccacctcaccagtcgcaccaccatcacccgccgcag
cagcctcaaccggtgatgcagctgatgcaactgcgtccaaccatgatgcagccgcctttt
ggagctggtggtggaggctacatgaacatgcagcctggtggaatccctcagcaaattgca
cctgctccacctgttgatataatggaggaggagccgccttctaaaaagattcgaagcgag
gacaacctgattccagaagcagactttattgccacccacaagagccctgtgaccattcag
gttttggtacccaattccgacaaatcagagtggaagcttaatggacagatgatagccgtg
accatggcactttctgaacccattgccaatctgaagacgaagctgcaggacgaaactggc
atgccaccggccaagcagaagatattttatgagggaatgttcttcaaagacagcaatacc
atggctttttacaatctggtaaacggaaccacggtgcatttacaggtcaaggagcgtggt
ggacgcaaaaagtag

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