Drosophila melanogaster (fruit fly): Dmel_CG17462
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Entry
Dmel_CG17462 CDS
T00030
Symbol
Trf4-2
Name
(RefSeq) topoisomerase related function 4-2, isoform B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG17462 (Trf4-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG17462 (Trf4-2)
03016 Transfer RNA biogenesis [BR:
dme03016
]
Dmel_CG17462 (Trf4-2)
Enzymes [BR:
dme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dmel_CG17462 (Trf4-2)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Dmel_CG17462 (Trf4-2)
Transfer RNA biogenesis [BR:
dme03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Dmel_CG17462 (Trf4-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
42983
NCBI-ProteinID:
NP_001262941
FlyBase:
FBgn0039251
UniProt:
Q9VC07
LinkDB
All DBs
Position
3R
Genome browser
AA seq
407 aa
AA seq
DB search
MCDEANPAKPWQLPDVVYGNGIPALCLLHQEIEQFYNYIRSTPTEFCLRAGAVRRIEDVV
LSIWPSASVDLFGSFRTGLNLPDSDIDLVVYYKFWNPRLLHELQNELVSQGVTDPDTVTV
LDKASVPVVKFTDLISRIRFDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSL
HGFNEVYNSGGVSSYALTLMVISFLQQHARSNRRLSEHSKLALLLIQFLDYYGRKFDFFK
YGISVLGQGGCVEKARLRSTLGENNWQSVLCIEDPVTPTNDIGRSSYGVLGVMQGFGAAF
VKLSKLVDSDSSKIVGPILANIVEVPQSIINYRAWVHYNFQHLLTPELPCADSLVQPSPT
GSTSPSASASASEDERSGGPATIGFGRCDDPPQNIDIVADLANLKMN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaagcgaatccagcgaagccgtggcagcttcccgatgtggtgtacggcaat
gggattccggcgctgtgcctgctgcaccaggagatcgagcagttctacaactacatccgg
tccacgccaacagagttctgcttgcgggcaggtgcagtgcgtcgcatcgaggatgtggtg
ctttccatttggccaagcgcatccgtcgatctctttggctcatttcggaccgggctaaat
ctgccggactcggacattgatctggttgtgtactataagttctggaaccccaggctgctg
catgagcttcaaaacgaactagtcagccaaggagtaactgatccggacactgtgaccgtc
ctcgacaaggcctctgtgccagtggtcaagtttacggacctcatttcccgcatcaggttc
gatgtgaccttcaactccgtagcatccggcgttcaggccgccgacctgatcaaggacttt
atccgccattttcccgaactacccaaactggtcatggtgctcaagcagttcctcagcctt
cacggattcaacgaggtctacaactccggcggagtctcgtcctacgcactcacgctaatg
gtgatcagctttctgcagcagcatgcgcgctccaacaggcgtttaagtgaacacagtaag
ctggccctgctgctcattcagtttctagactactacggccgcaagtttgacttcttcaag
tatggaatttctgtcctcggccaaggcggttgcgtggagaaggctcgacttcgctccacg
ctcggcgagaacaactggcagtcggtgctttgcatagaggatccagtgacgccgaccaac
gacatagggaggagctcctatggggtgctcggcgtgatgcagggattcggggcagccttc
gtgaagctctcgaagctggtggactccgactcgtccaagatcgtcggccccatactggcc
aacattgtagaggtgccgcagtccatcatcaactaccgggcttgggtgcactacaacttc
cagcaccttttgacaccggaattgccttgtgccgattcccttgtacaaccgtcgcctacg
ggatccacatccccctccgcctccgcctccgcctccgaggatgagcgctcgggcgggccg
gctactattggattcggccgatgtgatgatcctccccaaaacatagacatagttgccgac
cttgcaaaccttaagatgaattaa
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