Drosophila melanogaster (fruit fly): Dmel_CG18271
Help
Entry
Dmel_CG18271 CDS
T00030
Symbol
slx1
Name
(RefSeq) nuclease slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03440
Homologous recombination
dme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dmel_CG18271 (slx1)
03460 Fanconi anemia pathway
Dmel_CG18271 (slx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG18271 (slx1)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Dmel_CG18271 (slx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H
U-box_ZFPL1
DUF7705
zf-RING_2
T5orf172
Motif
Other DBs
NCBI-GeneID:
40578
NCBI-ProteinID:
NP_649484
FlyBase:
FBgn0037263
UniProt:
Q9VN41
LinkDB
All DBs
Position
3R:4641963..4644636
Genome browser
AA seq
297 aa
AA seq
DB search
MNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLG
CDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQPSLSTRLKMYPELKRKLPRET
FFDYNFRILSNMLGVGPWNRLPLTVRWLETDYERPFSKALPKHMEIVSGKVSISASQRRR
PDDAVPPPPVAWASECHLCMQEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYI
PVGGECPLCETRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTPELSD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctacgacccacaggacacagcttctcaacaggaggaatccgtcgcgctgaag
ggccacttctacggcgtctatttgctatgcagtcagagcttggatcctcgctaccgggga
aaatgctacgtgggcttcaccgtgaaccccaaacggcggatacgccaacacaatcttggt
tgtgatttcggtggcgcgaggaaaaccagtcgcaaagggccgtggctgatggtaatgatc
gtgcacggattcccgaataatacagtggcactccagtttgaatgggcttggcaacagccg
tcgctttcaactaggcttaaaatgtaccctgaattaaaacgaaaactgcccagggagacg
ttctttgactacaactttaggatccttagtaatatgctgggggttggcccttggaataga
ttaccgctcaccgttcgctggctagaaacggattacgagaggccattcagcaaggcactg
cctaaacacatggaaattgtgagtggcaaggtttccattagtgcctcacaacgtaggaga
cctgatgatgcagtacctcctccacctgtggcgtgggcttccgagtgccacctttgtatg
caggaaatggagcaaccggagaaatcccgcctgggatgcacaaatcaaatgtgtcggctg
acatgccatatggtgtgcctggccaattaccttctgggcgacgagccaggtcattacatc
ccagttggaggagagtgtccgctttgtgagactcgtctcagctgggcagcactgctgcag
cgcaaacgtcttcttttgggcgtgcctgaagaactgcaggatcatgacgaggatctgagc
gacgacattgatgtagacagcgatattgaagataccccggagctcagcgattag
DBGET
integrated database retrieval system