KEGG   Drosophila melanogaster (fruit fly): Dmel_CG1898
Entry
Dmel_CG1898       CDS       T00030                                 
Symbol
HBS1
Name
(RefSeq) HBS1, isoform B
  KO
K14416  elongation factor 1 alpha-like protein
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dmel_CG1898 (HBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG1898 (HBS1)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Dmel_CG1898 (HBS1)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 DUF4602
Other DBs
NCBI-GeneID: 117365
NCBI-ProteinID: NP_001286906
FlyBase: FBgn0042712
UniProt: Q9W074
LinkDB
Position
3L
AA seq 670 aa
MSRHRIVRTMDYNDEYDGYDDIYGHSVEDEHCISPTDAQQWLYDRARGQQSISAFISKNK
DIQEEEADEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRI
VETSMKFDYDMQKILDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPPKISLK
EPRRGFEIPSPKVPSSPVVSGRNTPVDISAGDDISRSSATVFKVSKEQAVRNARQLYEKE
RADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVL
DETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATR
GEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTVGWSQDRFTEIVTKLKSFLKLAG
FKDSDVSFTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRMSVS
DIYKGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVT
LPALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVV
CKLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVT
IAAGMVTKIR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcgcggcacaggatagtgcgcaccatggactacaatgatgagtacgacggctacgac
gacatctacgggcactccgtggaggacgagcactgcatctcgcccacggatgcccagcaa
tggctctacgatcgggctcgtggccagcagagcatctcggcgttcatcagcaagaacaag
gacatccaagaggaggaggccgacgaggatgaggacgaggacgccgccttcgccaaggct
cgccgcgactccgagagcttccaaatgccgcaactggacgagatcgagcaggccaagctg
agctcctgcgtggacgaggtgcgcagcgtggtgggcgatgccgtctccgagcgccgcatc
gtggagacatccatgaaattcgactatgacatgcagaagatcctggacgagatcctcaac
gaagagaccaacaagtctgccaagccggctgtgaataagatgaaagcgcccgctgctcca
gtgctgccaaagacggtcagcaaaacggtgcctacgccaccacccaagatcagccttaaa
gagccgcgacgtggcttcgaaataccctcgcccaaggtgccctcatcgcctgtggtctcg
ggcagaaacacacccgttgacattagcgccggcgacgacatctcccgtagctcagcaacc
gttttcaaggtctccaaggaacaggccgtgcgcaatgcccgccagctgtacgagaaggag
cgagccgaccagaagagccacattcacatgattgtcattggtcacgtcgacgccgggaag
agtacgctgatgggccatctactgtacgacaccggcaacgtttcgcagcgagtgatgcac
aagcacgagcaggagtccaagaagctgggcaagcagagcttcatgtatgcctgggtgctg
gacgagacgggcgaggagcgggcccgcggcatcaccatggacgtgggccagtcgcgtatc
gaaaccaagaccaagatcgtcacactgctggatgctccggggcacaaggacttcattccg
aacatgatctccggtgccacacaggcggatgttgcccttctggtggtggatgctacaagg
ggagagtttgaatccggctttgagctcggcggacagactagagagcacgccattctagtg
cgatccctgggggttaaccagctaggcgtggtcatcaacaagctggacaccgttggctgg
tcccaggaccgattcacagagattgtgaccaagctaaagtccttcctcaaactggcgggc
ttcaaggattccgatgtgagttttacgccctgttccggactaaccggcgagaacctcacc
aagaaagcccaggaacccgccctgaccaactggtacagtggacgccacctcctcgatgtc
attgagaacttcaagatccccgaaagagccatcgacagaccgctgcgaatgtccgtgtcg
gacatttacaagggcactggctccggattctgcatctcgggacgagtggaaaccggagtg
ctgtgcctgaacgacaaggtgctggtgggtgccagccgggagcaggcccaagtgaaatcc
cttaccatgaacgaattcccacagacttgcgtgttcgccggcgatcaggtctccgtcacc
ctgcccgccttggacatcaacaacgtcaccgtgggctgcatcatcagcgatccacaaacc
cctattccggtgacaacgcgattccaggcccgcataatcgtgttcaacgtcaaggtgccc
attaccatgggcttccccgtgctgctgcaccaccaatccctaatagagcccgccgtggtc
tgcaagctgaccgcatcgattcacaagagcaccggcgaggtggtcaagaagaagccgcgt
tgcctgggcaacaactcgtgtgccctagtggaactggaaaccagcagacccatctgcatc
gagcggtatgcggacttcaaggagctgggacgcgtgatgcttcgcgtggcgggagtcacc
attgccgccggaatggtcaccaagatccgctag

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