Drosophila melanogaster (fruit fly): Dmel_CG1898
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Entry
Dmel_CG1898 CDS
T00030
Symbol
HBS1
Name
(RefSeq) HBS1, isoform B
KO
K14416
elongation factor 1 alpha-like protein
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Dmel_CG1898 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG1898 (HBS1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Dmel_CG1898 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DUF4602
Motif
Other DBs
NCBI-GeneID:
117365
NCBI-ProteinID:
NP_001286906
FlyBase:
FBgn0042712
UniProt:
Q9W074
LinkDB
All DBs
Position
3L
Genome browser
AA seq
670 aa
AA seq
DB search
MSRHRIVRTMDYNDEYDGYDDIYGHSVEDEHCISPTDAQQWLYDRARGQQSISAFISKNK
DIQEEEADEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRI
VETSMKFDYDMQKILDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPPKISLK
EPRRGFEIPSPKVPSSPVVSGRNTPVDISAGDDISRSSATVFKVSKEQAVRNARQLYEKE
RADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVL
DETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATR
GEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTVGWSQDRFTEIVTKLKSFLKLAG
FKDSDVSFTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRMSVS
DIYKGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVT
LPALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVV
CKLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVT
IAAGMVTKIR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacaggatagtgcgcaccatggactacaatgatgagtacgacggctacgac
gacatctacgggcactccgtggaggacgagcactgcatctcgcccacggatgcccagcaa
tggctctacgatcgggctcgtggccagcagagcatctcggcgttcatcagcaagaacaag
gacatccaagaggaggaggccgacgaggatgaggacgaggacgccgccttcgccaaggct
cgccgcgactccgagagcttccaaatgccgcaactggacgagatcgagcaggccaagctg
agctcctgcgtggacgaggtgcgcagcgtggtgggcgatgccgtctccgagcgccgcatc
gtggagacatccatgaaattcgactatgacatgcagaagatcctggacgagatcctcaac
gaagagaccaacaagtctgccaagccggctgtgaataagatgaaagcgcccgctgctcca
gtgctgccaaagacggtcagcaaaacggtgcctacgccaccacccaagatcagccttaaa
gagccgcgacgtggcttcgaaataccctcgcccaaggtgccctcatcgcctgtggtctcg
ggcagaaacacacccgttgacattagcgccggcgacgacatctcccgtagctcagcaacc
gttttcaaggtctccaaggaacaggccgtgcgcaatgcccgccagctgtacgagaaggag
cgagccgaccagaagagccacattcacatgattgtcattggtcacgtcgacgccgggaag
agtacgctgatgggccatctactgtacgacaccggcaacgtttcgcagcgagtgatgcac
aagcacgagcaggagtccaagaagctgggcaagcagagcttcatgtatgcctgggtgctg
gacgagacgggcgaggagcgggcccgcggcatcaccatggacgtgggccagtcgcgtatc
gaaaccaagaccaagatcgtcacactgctggatgctccggggcacaaggacttcattccg
aacatgatctccggtgccacacaggcggatgttgcccttctggtggtggatgctacaagg
ggagagtttgaatccggctttgagctcggcggacagactagagagcacgccattctagtg
cgatccctgggggttaaccagctaggcgtggtcatcaacaagctggacaccgttggctgg
tcccaggaccgattcacagagattgtgaccaagctaaagtccttcctcaaactggcgggc
ttcaaggattccgatgtgagttttacgccctgttccggactaaccggcgagaacctcacc
aagaaagcccaggaacccgccctgaccaactggtacagtggacgccacctcctcgatgtc
attgagaacttcaagatccccgaaagagccatcgacagaccgctgcgaatgtccgtgtcg
gacatttacaagggcactggctccggattctgcatctcgggacgagtggaaaccggagtg
ctgtgcctgaacgacaaggtgctggtgggtgccagccgggagcaggcccaagtgaaatcc
cttaccatgaacgaattcccacagacttgcgtgttcgccggcgatcaggtctccgtcacc
ctgcccgccttggacatcaacaacgtcaccgtgggctgcatcatcagcgatccacaaacc
cctattccggtgacaacgcgattccaggcccgcataatcgtgttcaacgtcaaggtgccc
attaccatgggcttccccgtgctgctgcaccaccaatccctaatagagcccgccgtggtc
tgcaagctgaccgcatcgattcacaagagcaccggcgaggtggtcaagaagaagccgcgt
tgcctgggcaacaactcgtgtgccctagtggaactggaaaccagcagacccatctgcatc
gagcggtatgcggacttcaaggagctgggacgcgtgatgcttcgcgtggcgggagtcacc
attgccgccggaatggtcaccaagatccgctag
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