Drosophila melanogaster (fruit fly): Dmel_CG1957
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Entry
Dmel_CG1957 CDS
T00030
Symbol
Cpsf100
Name
(RefSeq) cleavage and polyadenylation specificity factor 100
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Dmel_CG1957 (Cpsf100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG1957 (Cpsf100)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Dmel_CG1957 (Cpsf100)
U7-dependent histone pre-mRNA processing factors
Dmel_CG1957 (Cpsf100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
43426
NCBI-ProteinID:
NP_651658
FlyBase:
FBgn0027873
UniProt:
Q9V3D6
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Position
3R
Genome browser
AA seq
756 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD
TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT
SPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSS
ESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDD
YRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLLEKPTKLISQRKTI
EVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTP
QKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVE
QDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNG
TLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacctccattatcaagctgcacactatatctggggcgatggacgagtccccgccatgc
tatatcctacagatagacgatgtgcggatattacttgactgcggatgggacgaaaagttc
gatgccaactttatcaaggaactgaagaggcaggtgcacaccctggacgccgtgctgcta
tcccatccggatgcatatcatcttggagccctgccatacttggtgggcaagctggggctc
aattgccccatctacgccaccattcccgtgttcaaaatgggtcaaatgtttatgtatgac
ctttacatgtcgcacttcaatatgggagacttcgatctattttcgctggacgacgtggac
acggctttcgaaaagataacccagttgaaatacaaccaaacagtttcactgaaggacaaa
ggatatggaatatccattacgcctttgaacgctggacacatgatcggcggcaccatctgg
aagatcgtcaaggtgggcgaggaggatattgtgtacgccaccgacttcaaccataagaag
gagcgccacttaagtggctgcgagctggacaggctgcaaagaccttcgctgctcattacc
gacgcctacaacgcacagtaccagcaggccagaaggagggcccgcgatgaaaagctaatg
accaacatcctgcaaacggtgcgtaacaacggcaatgtcctgatagccgtggatacggca
ggacgagtcctggagttggcccacatgctggaccagctgtggaagaacaaggaatctggg
ctaatggcctactccctggcccttcttaacaatgtgagctacaacgtgattgagttcgcc
aagtcgcagatagaatggatgagtgacaagctcacgaaggctttcgaaggtgcccgcaac
aatccctttcagttcaagcacatccagctgtgccattcactggcggacgtctataaattg
cccgctggtccaaaagtggtgttggccagtaccccagatctggagagcggattcacgagg
gatctcttcgtgcaatgggccagcaatgccaacaatagcataatccttactactcgtacg
tctcccggcactttagccatggaactggtggagaactgcgcaccgggcaagcaaatcgaa
ttggacgtcaggcgaagagttgacttagaaggagctgagttggaggagtacctacgcaca
cagggcgagaaacttaatccccttatcgtaaagcccgatgtggaggaagagagcagttcc
gagtccgaggacgacatcgagatgagcgtcatcacgggcaagcatgatattgtggtcaga
ccggagggtcgccatcactccggttttttcaagtccaacaaacgacaccacgtgatgttc
ccctatcacgaggaaaaggtgaagtgcgatgagtatggggagatcatcaatctagacgac
taccggattgcggatgcgacaggctatgagtttgtacctatggaggagcaaaacaaggag
aatgttaaaaaggaagaaccgggcataggagcagaacaacaggctaacggaggaatcgtc
gacaatgatgttcagttgctggagaagcccaccaagctgataagccaacgcaaaacaatc
gaggtgaatgcccaagtccagaggatcgatttcgaaggtcgctctgatggcgagtccatg
ctaaagatcctctcccagttgaggccacgaagggttatcgtcatacacggcactgccgaa
ggcacacaagtggtggccaggcactgcgaacagaatgtcggtgcgcgcgtttttactccg
cagaagggggaaatcattgatgtcaccagtgagattcacatctatcaggtacgcctgacg
gaaggacttgtctcccagctgcagttccaaaagggcaaggacgcggaggtggcgtgggtg
gatggtcgcctgggcatgcgggtgaaggccatcgaagcacccatggacgtaactgtggag
caggacgcttccgtgcaagaaggcaagacattgactcttgaaacactggcggacgatgag
attcctatccacaactcagtgctcattaacgagctgaaactgtccgactttaagcagact
ctcatgcgtaataacatcaactcggagttctccggcggcgtgctctggtgcagcaacgga
actctggccttgaggcgagtggatgccggcaaggtagccatggagggatgcttatccgag
gagtactacaagatcagggagttgctgtacgagcagtatgcgatcgtttaa
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