Drosophila melanogaster (fruit fly): Dmel_CG2125
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Entry
Dmel_CG2125 CDS
T00030
Symbol
ci
Name
(RefSeq) cubitus interruptus, isoform A
KO
K16799
transcriptional activator cubitus interruptus
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
Dmel_CG2125 (ci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dme03000
]
Dmel_CG2125 (ci)
Transcription factors [BR:
dme03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
Dmel_CG2125 (ci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
43767
NCBI-ProteinID:
NP_524617
FlyBase:
FBgn0004859
UniProt:
P19538
H5V858
Structure
PDB
LinkDB
All DBs
Position
4:complement(47710..57041)
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AA seq
1397 aa
AA seq
DB search
MDAYALPTYFPLAYSELQFLASRRAAAVAAAATVLPGSPCINQHHPTDVSSSVTVPSIIP
TGGTSDSIKTSIQPQICNENTLLGNAGHQHNHQPQHVHNINVTGQPHDFHPAYRIPGYME
QLYSLQRTNSASSFHDPYVNCASAFHLAGLGLGSADFLGSRGLSSLGELHNAAVAAAAAG
SLASTDFHFSVDGNRRLGSPRPPGGSIRASISRKRALSSSPYSDSFDINSMIRFSPNSLA
TIMNGSRGSSAASGSYGHISATALNPMSHVHSTRLQQIQAHLLRASAGLLNPMTPQQVAA
SGFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDVSQVPAAAFSLKNLDDAREKK
GPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGIPGDVKVNSRLDEYIN
CGSISIPSNEYDCANADTTDIKDEPGDFIETNCHWRSCRIEFITQDELVKHINNDHIQTN
KKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRS
HTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVK
TVHGAEFYANKKHKGLPLNDANSRLQQNNSRHNLQEHNIDSSPCSEDSHLGKMLGTSSPS
IKSESDISSSNHHLVNGVRASDSLLTYSPDDLAENLNLDDGWNCDDDVDVADLPIVLRAM
VNIGNGNASASTIGGSVLARQRFRGRLQTKGINSSTIMLCNIPESNRTFGISELNQRITE
LKMEPGTDAEIKIPKLPNTTIGGYTEDPLQNQTSFRNTVSNKQGTVSGSIQGQFRRDSQN
STASTYYGSMQSRRSSQSSQVSSIPTMRPNPSCNSTASFYDPISPGCSRRSSQMSNGANC
NSFTSTSGLPVLNKESNKSLNACINKPNIGVQGVGIYNSSLPPPPSSHLIATNLKRLQRK
DSEYHNFTSGRFSVPSYMHSLHIKNNKPVGENEFDKAIASNARRQTDPVPNINLDPLTNI
SRFSTTPHSFDINVGKTNNIASSINKDNLRKDLFTVSIKADMAMTSDQHPNERINLDEVE
ELILPDEMLQYLNLVKDDTNHLEKEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP
PSNVDIQPNTTKFTVQDKFAMTAVGGSFSQRELSTLAVPNEHGHAKCESFHHQSQKYMNT
DIGSKQQSALPSAHQRQTEKSNYNQIIDSSMTSLPELNVDSIYPRNETENIFKVHGDHDN
EIQCGIISQSQMSPSTNLNNDGQFSTVNMQPITTSKLFPPEPQKIVCDTQASNTSVMHLD
TYQRTLEYVQSCQNWMETNNTSTNQIQSLPGMPVNNTLFPDVSSSTHPYHGTNMVINDMT
TSLTSLLEENRYLQMMQ
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctacgcgttacctacatattttcctcttgcgtattctgaattgcagttttta
gcgtccaggagagcagctgccgtcgctgcagcggctactgttttaccaggatcaccatgc
ataaaccaacatcacccaactgacgtttcaagctcggtaacagtgccatcaattattcca
acgggtggaacatcagattcaattaaaacttcaatacaaccacaaatatgcaatgaaaac
acccttcttggaaatgctggccaccagcacaatcatcagcctcaacatgttcacaatata
aatgttactggacagccacatgactttcacccggcctatagaattcccggatacatggaa
cagttgtattctcttcaacgaactaattcagcttcatcttttcacgatccctatgtcaat
tgtgcatcagcattccatcttgccggacttggtttgggatcagctgattttttgggcagc
cgaggtttgagctctttgggtgaactgcataatgctgctgtggcagcagcagcagccgga
tctctcgcaagtactgattttcacttcagtgttgatggaaacaggcggttgggtagccct
cgaccaccaggaggaagtatacgtgccagcataagccgcaaacgagcactttcgtcatcg
ccttattccgattcatttgatattaattcaatgattcgattttcgccaaactctttagcc
acaattatgaacggttctcgaggaagcagcgcggctagtggttcttacggtcatatttct
gctaccgcccttaatcccatgtctcatgttcattcaacccgtctgcaacagatacaagct
catttattgcgtgcaagtgcaggtctgttaaatccgatgacaccacaacaagttgctgca
tctggattttctatagggcatatgccaacctctgcttctttgagagtgaatgacgtacat
cctaatctaagcgattcacatatccagataacaacatccccaactgttacaaaggatgta
agccaggtcccagcggcagcattctcgttgaagaacttagatgatgcaagagagaaaaag
ggaccctttaaagatgttgtccccgagcagccttcatcgacatctggcggcgtagcacaa
gtagaagccgacagtgcgtcttcacagttgtctgaccgttgttacaacaacgtggtaaac
aatattacaggcattcctggtgacgttaaagtaaacagccgcttggatgagtatattaat
tgcggatcaatttcgattccgtcaaatgaatatgattgtgctaatgctgatactacggat
atcaaggatgaacccggagatttcattgaaacaaattgtcattggcgtagctgtcgcatt
gagttcattacgcaagatgaacttgttaaacatataaataatgatcatattcaaacaaac
aagaaagcttttgtctgtcgatgggaagattgtacacgcggtgaaaaaccatttaaagcg
cagtatatgcttgttgtgcatatgcggcgtcataccggtgaaaagccacacaaatgcacg
tttgaaggctgctttaaggcatattcacgtttggaaaacctgaaaactcatttacggtca
cacacaggagaaaaaccatacacttgcgagtatccgggatgtagcaaagcctttagtaat
gctagtgatcgcgcaaagcatcaaaatcgaacacacagtaatgagaaaccgtacatttgt
aaagcacctggatgcacaaaacgttacaccgacccgagctctttgagaaaacatgtaaaa
acagtccatggagctgaattttatgcaaataaaaaacataaggggttgcctctaaatgac
gcaaactctcggttacaacaaaacaacagtcggcataatcttcaagagcacaatatcgac
tcaagcccttgcagtgaagactcacatttgggaaaaatgttaggcacgtctagtcctagc
attaaatctgaatcagatataagctcatcaaaccatcacttagtaaatggagttcgagca
tctgacagtttgttaacatattcacctgatgatcttgctgaaaatcttaatttggatgat
ggctggaattgtgacgatgacgtggacgtggcagacctaccaattgtgttacgtgctatg
gtaaatattggtaacggaaatgcatccgcctcgactattggaggttctgttttggctagg
caacggtttagaggtcgtcttcaaactaaaggtataaattcaagtacgattatgctttgc
aacattccagaaagcaatcgtacctttggaattagcgaacttaatcagcgtattacagaa
ctgaaaatggagccaggtactgatgctgaaattaaaattcctaagctcccaaacacgacc
ataggaggatatacggaagaccctttacaaaaccaaacaagttttcgtaatacagtatcg
aataagcaaggaactgtttccggatcgatacaaggacagtttcgtcgcgatagtcaaaat
tccactgcaagcacttattacggtagcatgcaaagtcgtcgtagcagtcaatcatcccag
gtgtcttctatacctaccatgcgaccgaacccctcgtgtaactcgactgcatccttttat
gatcccatttcaccagggtgctcacggcgctctagccaaatgtcaaatggtgctaactgc
aattcatttacttccacatcaggactacccgtattaaataaggaatcgaacaaaagctta
aatgcatgtattaataaacctaatatcggggttcagggtgttggaatttacaatagcagt
ctacccccacctccatcgtcccacttaattgcaacaaacttaaagcgcttacagcggaaa
gattcagaatatcacaatttcactagcgggcgattttctgttcctagttatatgcattct
ttacacataaaaaacaacaaaccagtcggagaaaacgaatttgataaagcaatagcgagt
aatgcacgacgtcaaactgatccagtgccaaacataaacttagatccattaacaaatatt
tctcggttcagtacaacaccgcatagctttgatattaatgtcggaaagactaataatata
gcatcgtcaattaataaggacaatttaagaaaggatctgttcactgtttcaattaaggct
gacatggcaatgactagtgaccaacatccaaatgaaagaataaatttggacgaagttgaa
gaacttatacttcccgatgaaatgcttcagtacttaaacttggtaaaagacgacacaaat
catttggaaaaagaacatcaagctgtacctgtggggtcaaatgtatccgaaactatagct
tcaaaccactaccgagaacaatcaaatatatattacaccaataaacaaattttaacaccg
ccttctaacgttgatatacaaccaaatacaacaaagtttacagtacaagacaaatttgct
atgacggcggtcgggggttcattcagtcaaagagaattaagtaccctagctgtaccaaat
gaacatgggcatgccaaatgcgaaagcttccatcaccagtctcaaaaatatatgaacact
gacattggctccaagcagcaatcagcattaccgtcagctcatcaacggcaaacagaaaaa
tcaaattataatcaaatcatagactcatcgatgactagcttgccagaacttaatgtagat
tcaatatatccacgaaacgaaacagaaaatatatttaaagtacacggagatcatgataat
gaaatccaatgcggcattataagtcaatctcaaatgtcaccttccactaatttgaataat
gatggtcagttttctaccgtaaatatgcaaccaataacaacatccaaattatttccccct
gaaccacaaaaaatagtttgtgacacccaagcgagtaatacttcggttatgcatttagat
acatatcagcgtactctggaatatgtacaaagttgtcaaaactggatggagacgaacaac
acatctaccaatcaaatacaaagcctcccgggaatgccggtaaacaatacattgtttccc
gatgttagcagctctacacatccatatcatgggacaaatatggtgatcaacgatatgact
acatcccttacttccttactcgaggaaaatagataccttcaaatgatgcagtaa
DBGET
integrated database retrieval system