KEGG   Drosophila melanogaster (fruit fly): Dmel_CG2161
Entry
Dmel_CG2161       CDS       T00030                                 
Symbol
Rga
Name
(RefSeq) regena, isoform A
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG2161 (Rga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG2161 (Rga)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dmel_CG2161 (Rga)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Dmel_CG2161 (Rga)
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 40683
NCBI-ProteinID: NP_730966
FlyBase: FBgn0017550
UniProt: Q94547
LinkDB
Position
3R
AA seq 585 aa
MANLNFQQPPRSIANAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQAP
QQQQQQQQQPQLSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERRAMQGLGSGPMSNMG
NFMQTGRGGYGTGGGGGGPLNNFHVFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLP
QSNPLQPPGSKPYGNFFTSFGMVKQPTSEQSEFTMSNEDFPALPGTQNSDGTTNAVGSVA
GTGGSGGASTENHLDGTEKPMNSIVVSGSASGSSGSNVGVVGGNGLGAVGSGIGGLAVGG
GGGAGSSGGGGVGGNAASGVVGGSHVGLVGSNSGIGGVNSVPNSNAMMGVGGGLGSGSGS
SGSGAGGEHLNDNSSNDKLVKSGVQTSPDGKVTNIPATMVNNQFGMVGLLTFIRAAETDP
NLVTLSLGTDLTGLGLNLNSQESLHTTFAGPFVAQPCRAQDVEFNVPPEYLINFAIRDKL
TAPVLKKLQEDLLFFLFYTNIGDMMQLMAAAELHSREWRYHVEEKIWITRIPGIDQYEKN
GTKERGTFYYFDAQSWKRLSKVFQIDPEKLDKCPNISAFMNGQSV
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggcgaatttaaattttcaacaacccccgagaagtatagcgaacgcggcgttagctggc
cggacaacaggcggattcggtggtagctccctggctggccatgtgacgcccacgtcgggc
atgtttcaaaccgacttcgccaactcctatccaggaacggcgaactacggacaggcgccg
cagcagcagcaacaacagcagcagcagccccaactgtcgccgaaccggaatgcccagctg
tcggtcggcggacccgccatctcgagcggcaaccgcaacgccaacctcttcggccagcgt
cagtttgtggagcggcgagccatgcaaggattgggcagtggccccatgtcgaacatgggc
aacttcatgcagacgggtcgcggcggctacggaacgggcggaggcggtggcggtcctttg
aataacttccacgtgttcggcggcggcggtggtagcgacacctccacgcctgccctgctc
gatcccacggagttcccctcgctgacgaatgcgcgcggccagaacgaccagacactgccc
caatcgaatccgctccagccgccgggcagcaaaccctatggtaatttctttacctctttt
ggcatggtgaagcaaccgacgtcagagcaatcggagttcacgatgtctaacgaggacttc
cctgcgttaccgggcacccaaaactcggacggcacaacgaacgcggtggggagcgtcgcc
ggaacaggaggctccggaggtgcgtccacagagaaccacttggacggcacggaaaagccg
atgaattcgatagtggtcagcggatcagcgagcggcagcagcggttccaacgtcggcgtt
gtaggcggcaatggtctcggtgccgttggcagtggtatagggggcttggcagtaggcggc
ggcggaggagctggtagctcaggaggcggaggagtcggcggcaatgcagccagcggcgtt
gtcggcgggtcccatgtaggactggtgggcagtaacagcggcattggcggcgtcaacagc
gtacccaacagcaatgccatgatgggcgtaggcggcggcctggggagtggaagcggctcg
tctgggagcggagcgggcggcgagcatctgaacgataattccagcaacgataaacttgta
aagagcggcgtgcaaacttcgccagatgggaaggtcacaaacataccagcgaccatggtg
aacaaccagttcggcatggttggcctgctgacgttcattcgggctgcagaaacggatccc
aatctggtgacgctctccttgggtacggatctcacgggtttaggcctgaacctgaactcg
caggagagcttgcatacaaccttcgctggccccttcgtagcacagccctgcagagcacaa
gacgttgagttcaacgtgccacccgaatatctgattaactttgcgataagagacaaacta
acagcgccggtactgaaaaagctgcaagaagacctgctctttttccttttttacacgaac
atcggcgatatgatgcaattgatggcagctgctgaattgcatagtcgcgagtggcgatac
cacgtggaggagaaaatatggataactcgaattcctggcattgatcaatatgaaaaaaat
ggtacaaaagagcgcggcaccttctactactttgatgcgcaaagttggaaacgtttgtcc
aaggttttccaaatagatcccgagaaattagataaatgtcccaatataagtgcgtttatg
aatggacagtctgtataa

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