Drosophila melanogaster (fruit fly): Dmel_CG2161
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Entry
Dmel_CG2161 CDS
T00030
Symbol
Rga
Name
(RefSeq) regena, isoform A
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG2161 (Rga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG2161 (Rga)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dmel_CG2161 (Rga)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Dmel_CG2161 (Rga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
40683
NCBI-ProteinID:
NP_730966
FlyBase:
FBgn0017550
UniProt:
Q94547
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Position
3R
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AA seq
585 aa
AA seq
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MANLNFQQPPRSIANAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQAP
QQQQQQQQQPQLSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERRAMQGLGSGPMSNMG
NFMQTGRGGYGTGGGGGGPLNNFHVFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLP
QSNPLQPPGSKPYGNFFTSFGMVKQPTSEQSEFTMSNEDFPALPGTQNSDGTTNAVGSVA
GTGGSGGASTENHLDGTEKPMNSIVVSGSASGSSGSNVGVVGGNGLGAVGSGIGGLAVGG
GGGAGSSGGGGVGGNAASGVVGGSHVGLVGSNSGIGGVNSVPNSNAMMGVGGGLGSGSGS
SGSGAGGEHLNDNSSNDKLVKSGVQTSPDGKVTNIPATMVNNQFGMVGLLTFIRAAETDP
NLVTLSLGTDLTGLGLNLNSQESLHTTFAGPFVAQPCRAQDVEFNVPPEYLINFAIRDKL
TAPVLKKLQEDLLFFLFYTNIGDMMQLMAAAELHSREWRYHVEEKIWITRIPGIDQYEKN
GTKERGTFYYFDAQSWKRLSKVFQIDPEKLDKCPNISAFMNGQSV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttaaattttcaacaacccccgagaagtatagcgaacgcggcgttagctggc
cggacaacaggcggattcggtggtagctccctggctggccatgtgacgcccacgtcgggc
atgtttcaaaccgacttcgccaactcctatccaggaacggcgaactacggacaggcgccg
cagcagcagcaacaacagcagcagcagccccaactgtcgccgaaccggaatgcccagctg
tcggtcggcggacccgccatctcgagcggcaaccgcaacgccaacctcttcggccagcgt
cagtttgtggagcggcgagccatgcaaggattgggcagtggccccatgtcgaacatgggc
aacttcatgcagacgggtcgcggcggctacggaacgggcggaggcggtggcggtcctttg
aataacttccacgtgttcggcggcggcggtggtagcgacacctccacgcctgccctgctc
gatcccacggagttcccctcgctgacgaatgcgcgcggccagaacgaccagacactgccc
caatcgaatccgctccagccgccgggcagcaaaccctatggtaatttctttacctctttt
ggcatggtgaagcaaccgacgtcagagcaatcggagttcacgatgtctaacgaggacttc
cctgcgttaccgggcacccaaaactcggacggcacaacgaacgcggtggggagcgtcgcc
ggaacaggaggctccggaggtgcgtccacagagaaccacttggacggcacggaaaagccg
atgaattcgatagtggtcagcggatcagcgagcggcagcagcggttccaacgtcggcgtt
gtaggcggcaatggtctcggtgccgttggcagtggtatagggggcttggcagtaggcggc
ggcggaggagctggtagctcaggaggcggaggagtcggcggcaatgcagccagcggcgtt
gtcggcgggtcccatgtaggactggtgggcagtaacagcggcattggcggcgtcaacagc
gtacccaacagcaatgccatgatgggcgtaggcggcggcctggggagtggaagcggctcg
tctgggagcggagcgggcggcgagcatctgaacgataattccagcaacgataaacttgta
aagagcggcgtgcaaacttcgccagatgggaaggtcacaaacataccagcgaccatggtg
aacaaccagttcggcatggttggcctgctgacgttcattcgggctgcagaaacggatccc
aatctggtgacgctctccttgggtacggatctcacgggtttaggcctgaacctgaactcg
caggagagcttgcatacaaccttcgctggccccttcgtagcacagccctgcagagcacaa
gacgttgagttcaacgtgccacccgaatatctgattaactttgcgataagagacaaacta
acagcgccggtactgaaaaagctgcaagaagacctgctctttttccttttttacacgaac
atcggcgatatgatgcaattgatggcagctgctgaattgcatagtcgcgagtggcgatac
cacgtggaggagaaaatatggataactcgaattcctggcattgatcaatatgaaaaaaat
ggtacaaaagagcgcggcaccttctactactttgatgcgcaaagttggaaacgtttgtcc
aaggttttccaaatagatcccgagaaattagataaatgtcccaatataagtgcgtttatg
aatggacagtctgtataa
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