KEGG   Drosophila melanogaster (fruit fly): Dmel_CG2261
Entry
Dmel_CG2261       CDS       T00030                                 
Symbol
CstF50
Name
(RefSeq) cleavage stimulation factor 50 kD subunit
  KO
K14406  cleavage stimulation factor subunit 1
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dmel_CG2261 (CstF50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG2261 (CstF50)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     Dmel_CG2261 (CstF50)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd CSTF1_dimer WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SPT8 WDR54 Beta-prop_WDR75_2nd VID27 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 43734
NCBI-ProteinID: NP_651883
FlyBase: FBgn0039867
UniProt: Q9V9V0
LinkDB
Position
3R:complement(31735503..31736963)
AA seq 424 aa
MRDEILDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQCAPSERLLHVMIAG
MQTLSDKDKTNSDDVLPGIDLEFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCDGSL
VATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVSYLEFHPKEHI
LASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEHNVLRVYDVA
TTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGA
AICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQTEAVFNHTEDY
VLFPDEATTSLCSWNSRNGCRLTLNSLGHNGPVRYITHSPNGPAFLTCSDDFRARFWYRR
ANNQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgcgtgatgagattttggaccccagtaacctagtgaagaaccgggagatactctaccga
ctgatgatcagccagctgatgtacgacggcctggagaagttcgccatggagctgtccatg
ctggtgaaggcggaccagtgcgctcccagtgaacgcctgctgcacgtaatgattgcaggg
atgcagacgctgagcgacaaggacaaaaccaactcggatgatgtgctgcccggcatagac
ttggaattcgagccggaggcttcggccttggccccggaaccacattcctacgaaaccgcg
tatgtgacctcgcacaagcaggcctgtcgcgccggcgccttcagttgcgatggttccctg
gtggccaccgggagcgtggatgccagcatcaagattctggacgtggagcggatgctggcg
aagtctgcgcccgaagatatcgagccgggcagggaacaacaaggccatccagtgattcgc
acgctctatgatcacactgatgaagtgtcttacctggagttccatcccaaggagcacatc
ctggcctccgcctcgcgcgatggcactgttaagttgtttgacattgccaagccttcggta
aagaaggcccacaaggtgttcaccgactgcgagccggtgctgtgcctgtcttttcatcct
actggtgactacgtagccatcggaacggaacataacgtcttgcgggtctacgatgtggcc
accacccaatgcttcgtgagtgccattccctcgcagcagcacaaggctggagttacttgc
gtgaaatattcgcccacggggaaactctacgccacaggcagctatgatggtgacatcaaa
atatgggatgggatcagcgggcggtgcatcaacaccattgccgaggcgcatggcggagcg
gcaatatgctcactggagtttacgcggaatggaaagtacctcctatcttccggtatggat
tcactggtttatctgtgggagctgtgtaccagtcgtcccattcagacgtacacgggcgct
ggaaccaccggcaagcaggagcaccagacagaggctgtattcaaccacacagaggattac
gtgcttttccccgacgaggccaccacttcgctttgctcgtggaactcccgtaacggctgc
cgcctgacccttaactcgcttggacacaacggacctgtccgctatattacgcattcgccc
aatggtcctgctttcctcacctgctccgacgactttcgggcacgtttctggtaccgaaga
gcaaataatcagtaa

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