Drosophila melanogaster (fruit fly): Dmel_CG31000
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Entry
Dmel_CG31000 CDS
T00030
Symbol
heph
Name
(RefSeq) hephaestus, isoform L
KO
K13218
polypyrimidine tract-binding protein 1
Organism
dme
Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG31000 (heph)
03041 Spliceosome [BR:
dme03041
]
Dmel_CG31000 (heph)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Dmel_CG31000 (heph)
Spliceosome [BR:
dme03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Dmel_CG31000 (heph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
48571
NCBI-ProteinID:
NP_001097992
FlyBase:
FBgn0011224
UniProt:
A8JRI1
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All DBs
Position
3R
Genome browser
AA seq
622 aa
AA seq
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MMSCPIPMPMPISSLHKSEFEPVNIGVKVRIDEQYIYKLNYLRGSDELLSQAAVMAPASD
NNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVL
KGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDY
SVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLR
VIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQN
IYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLI
AARQRPSLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTA
PAMRGYSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYL
AMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNI
YPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALI
KMHNHQLSESNHLRVSFSKSNI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctgccccattcccatgccaatgccaatttcttcattacacaaatcagaattt
gaaccggttaatattggagttaaggtaaggatcgacgaacaatatatatataaactgaac
tatttgcgcggaagcgacgaacttttgagtcaagcagcggtcatggcgcccgcttccgac
aataacaatcaggacctggccacaaagaaggccaaactggagccgggcactgtgctggcc
ggcggaattgccaaggcctcaaaagtcatccacttgcgcaacattccgaacgagtccggc
gaggcagatgtgattgccctgggcattccgtttggacgtgtgaccaacgtgctggtgctc
aagggcaagaaccaggctttcatcgagatggccgacgagatctccgcaacgtcaatggtg
tcctgttacacagtaactccgccccagatgcgcggccgcatggtctacgtgcagttttct
aatcatcgcgaactaaagacggaccaaggtcacaacaactcgaccgcccatagcgactac
agcgtccagtccccggcgagcggatcgcctctgccccttagcgccgctgccaacgcgacc
agcaacaatgcaaacagctcaagcgacagcaacagcgccatgggaatcttacaaaacaca
agcgccgtcaatgcgggcggcaacaccaacgctgccgggggacccaatactgtgctccgt
gtgattgtcgagtccttgatgtaccccgtctcgctggacatactgcaccagatcttccag
cgctacggcaaggtgctgaagattgtcaccttcacaaagaacaattcattccaggccctc
atccaatatccggacgccaattccgcccagcacgccaagtcgctcctggacgggcagaat
atatacaacggttgctgcacgttgcgtattgataacagcaagctgacggctctgaatgtt
aagtacaacaacgacaaatcgcgcgacttcactaaccccgctctgccacctggtgaaccg
ggagtggatatcatgcccaccgccggcggactgatgaacaccaatgatttgcttttgatc
gccgcccgtcagcgaccttctctctcaggtgataaaatagtcaacggcctgggcgccccc
ggagtcctgccgccctttgccttgggcctgggcactccactgaccggtggatacaacaac
gcactgcccaacttagcagctttctcgctggccaacagtggcgccctgcagacgaccgct
cctgcaatgcgaggttactcgaatgtcttgcttgtctcgaatttaaatgaggagatggtc
acgcctgatgctctctttaccctttttggtgtatacggcgatgtgcaacgtgtaaagatt
ctgtacaacaagaaggactcggcactcatacaaatggcggagccccagcaagcttatttg
gccatgtctcaccttgataaattacgtttatggggaaagccgatacgtgtgatggcaagc
aaacaccaggccgtccagctgcccaaggagggacagccggacgcaggactcacacgtgac
tactcgcaaaatccgttgcaccgcttcaagaaaccgggaagcaagaactaccagaacatc
tatccgccgtcggcgacactacatttaagcaacattccctcatcctgctctgaggatgac
atcaaagaagctttcacctcaaacagctttgaagttaaggcattcaaatttttcccgaag
gaccgtaaaatggcactgcttcaactgttgtccgtggaggaggctgtcctagcactgatt
aagatgcacaaccaccagctgtccgagtcgaatcacctgcgtgtaagcttctcgaagtcg
aacatctag
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