Drosophila melanogaster (fruit fly): Dmel_CG31716
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Entry
Dmel_CG31716 CDS
T00030
Symbol
Cnot4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4, isoform H
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG31716 (Cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dme03000
]
Dmel_CG31716 (Cnot4)
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG31716 (Cnot4)
04121 Ubiquitin system [BR:
dme04121
]
Dmel_CG31716 (Cnot4)
Enzymes [BR:
dme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Dmel_CG31716 (Cnot4)
Transcription factors [BR:
dme03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
Dmel_CG31716 (Cnot4)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dmel_CG31716 (Cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Dmel_CG31716 (Cnot4)
Ubiquitin system [BR:
dme04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Dmel_CG31716 (Cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
RRM_Nup35
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
34416
NCBI-ProteinID:
NP_001188776
FlyBase:
FBgn0051716
UniProt:
M9MRH8
LinkDB
All DBs
Position
2L
Genome browser
AA seq
1059 aa
AA seq
DB search
MNGLSSNDDAVECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDENKLCPACRKEYP
ENPADFKPLSQEEMIAFKSQKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPRLA
DADILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYVNNSDALRAIQSVNNIMI
DGRLIKTSLGTTKYCSHFMKNQQCPKGDCMYLHELGDPEASFTKEEMHQGKHLEYEKRLH
DTLIASLGPNATGIVNGNGASKANVAIPSSSSASSSSSGSGTNGSSASGNAQQKEAWPSL
SVSPINGKEAAATATSSSGKSKREKLRNEKRHEKNKAKNKNGSNTNANASNKENYVPETR
SSTSTETFAEATADAPASTKAEPPQASSNRTRADRGKDRTTASAKEQKKSKEAAPAPAAS
KPAERVETSESTIRQKKAEVTESCEDNLPQKRLAGTNVQRSVSSCSENSEGHVSESSLSE
KSLTGDYVEEKCNSVNSESQQESVKFQEELEKSNEAIVEAETILPTAESSEDISPAAVAP
GNGEVEGCLPVVDPVEPPSLADNGSRVTDALSKLNIFDDTPSFFTSPSFQQAPILKNKLD
LEMRQSHLPDLVNDIDGIQKASNTNEWEEAFKNVMMGNTQHMEEQLLQQQHLQQHQNLRH
QLVLQQEEFLRMQELQKRNNFATQINGPANDFLRAYELRAQANAIIQQQLLQQHAGENLF
GGNMSKFFDFHKSQPQSHHQYLNGHPPQINGNGAVPEPQRVAASLESNRLNSPFVENGLI
NSQQQQQQQQQQQKQRMMGMYEFMPPNTQSQQNRFTQNSIVDDDLGFDPFVETQKGLAEL
MENEVVQKQSINNENPLPKLPPQPQVPPHPQLVDNLQRARMPPPGFNHVNTLGLGGASRL
QLTSKIIPFMNMPVNGVGNSGAQGQHQMPMGVNWNAPMGMHQNPGQPVGDSQLQHPMAHN
KVYNNSDWTSMDPAILSFRQYSSFPQNQIPPHPQQQQDLFLQHLAQQQNSQSGGFNNQAQ
QMLPMGMPNSLLNGQQTQPPQVNANVQGMLEFLKSRQFV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcctgagcagcaatgatgatgcagtcgagtgccctttgtgtatggagccgctt
gaggtggacgatctgaccttctttccgtgtacctgcggatatcagatttgccgattctgt
tggcataggatccgcacggatgagaacaagctgtgtccggcatgccgaaaggagtatccc
gagaatccagctgacttcaagccgctgtcgcaggaggaaatgattgccttcaagtcccag
aaacgccaaagggaccaacaacgaaaacaaaagatcaccgagaaccgcaaacacttggcc
aacgttcgcgttgtccaaaagaacttggtgttcgttgtggggctaccgccacgacttgct
gatgcagacatattaaagaaacacgagtatttcggtaaatatgggaaaattcataaagtc
gttataaatccaagtaccacgtatgccggggtccagggtccatctgcttctgcgtatgtc
acatatgttaataactcggatgccttgcgggccattcaaagcgtcaataatattatgata
gacggtcggcttataaagaccagcttggggacaaccaaatactgtagccacttcatgaag
aaccagcagtgtcccaagggcgactgcatgtacttacatgaattgggcgatcccgaggcc
agtttcacaaaggaggaaatgcatcagggaaagcacctggagtacgagaagcgcctgcac
gatactctaattgcgtcattgggaccgaatgcaacaggtattgtaaatggtaatggagct
tctaaagcaaatgtcgcgattccatcgtcatcgtcagcgtcatcctcgtcctctggatcg
ggtacaaatggttcaagtgcatcaggtaatgcccagcaaaaggaggcctggccaagctta
tcggtctcgcccatcaatggcaaagaggcggctgccactgcgaccagttccagtgggaaa
agtaaacgggaaaagctgcgcaacgagaagaggcacgagaagaacaaggcgaagaataag
aacggcagcaatacaaacgccaatgcctcgaacaaggagaactatgttcccgaaacgaga
agcagcacaagtactgagacattcgcagaggctacggcggatgcaccggcttccaccaag
gcagaaccgccgcaagcctctagcaatagaacgagggcggatcgtggaaaagatcggacc
acggctagtgcaaaggagcagaagaagagcaaggaagctgctccagcacctgcagcaagt
aaaccggcggagcgggttgaaacaagcgagagtacaataagacaaaagaaggcggaagta
acagaaagctgtgaagataacttaccacaaaagagattagcgggaacaaacgttcaaaga
tctgtgagctcttgtagcgaaaatagcgaaggacacgtctctgagagtagcttaagtgag
aagagtttaactggtgattatgtggaggaaaagtgcaatagtgtgaattcggaaagccag
caagaaagtgtaaagtttcaggaggagctcgaaaagagcaacgaggcaattgtcgaggcc
gaaacgattctgccaacagctgagtcctctgaggacatcagtcccgctgcagttgcgcca
ggcaatggagaagtcgaaggatgcttacccgttgttgatccagtcgaaccaccgagtctg
gcggataatggaagcagagtaacagatgcgctatctaagctgaacattttcgatgacacg
cctagctttttcacatcgccatcattccagcaagcacccatattaaagaataagctagat
ttggaaatgcgacagtctcatttacctgacttggtcaacgacattgatggaatccaaaag
gcatccaatacaaacgagtgggaggaagccttcaaaaatgtgatgatgggcaacacgcag
cacatggaggagcaactgttgcagcagcaacatttgcagcagcatcagaatttgcgccac
cagctggtgttgcaacaggaggagttccttcgcatgcaagaattacagaaacgcaacaac
tttgcgacgcaaatcaacggtcctgcgaatgatttccttagagcttatgagctcagagct
caagccaatgcaatcattcagcaacaattattacaacagcacgcaggcgaaaatctattt
ggcggcaacatgtcgaagttcttcgatttccataaaagtcagccgcagtcacaccatcag
tatctaaatggacatccgcctcaaatcaatgggaacggtgctgtgccggagccgcaaaga
gtggcggcctctttggaaagcaatcgactgaattcgccttttgtcgaaaatggacttatt
aactcgcagcagcagcagcagcagcagcaacagcaacaaaagcagagaatgatgggaatg
tatgaatttatgcctccaaacacgcaatctcagcagaatcggtttacacagaactcgata
gtcgacgatgacttaggattcgacccgttcgttgagacccaaaagggacttgctgaactt
atggaaaatgaggtggtccaaaaacagagtattaataatgagaaccccttgccgaagttg
ccgccacagcctcaagttccaccccatccgcaattggtggacaacctgcagcgagctcgc
atgccgccgccaggcttcaatcacgtcaacacattgggcttgggcggtgcatccagactg
cagctcaccagcaaaataatacccttcatgaacatgcccgtcaatggggtgggcaacagc
ggtgcccagggacagcaccaaatgccaatgggtgtcaactggaatgcgccgatgggcatg
caccagaacccgggacagcccgtgggtgattcgcaattgcagcatccaatggctcacaac
aaggtttacaacaacagtgattggacttcaatggatccggctatactttcgtttagacag
tattcttcttttccacaaaaccaaattcccccacatcctcagcagcaacaggatttattt
ttgcagcatttggctcaacagcaaaattcccagagtggtggtttcaacaaccaggcacag
caaatgcttcctatggggatgcccaatagtttgctgaacggacaacaaacgcagccgcca
caggtcaatgccaatgttcagggcatgcttgagtttttaaaaagccgtcaattcgtttag
DBGET
integrated database retrieval system
