Drosophila melanogaster (fruit fly): Dmel_CG3312
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Entry
Dmel_CG3312 CDS
T00030
Symbol
Rnp4F
Name
(RefSeq) RNA-binding protein 4F, isoform F
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
dme
Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dme03041
]
Dmel_CG3312 (Rnp4F)
03036 Chromosome and associated proteins [BR:
dme03036
]
Dmel_CG3312 (Rnp4F)
Spliceosome [BR:
dme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Dmel_CG3312 (Rnp4F)
Chromosome and associated proteins [BR:
dme03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
Dmel_CG3312 (Rnp4F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Lsm_interact
HAT_PRP39_N
xRRM
Motif
Other DBs
NCBI-GeneID:
31448
NCBI-ProteinID:
NP_001096883
FlyBase:
FBgn0014024
UniProt:
Q9W4D2
A8JUY0
LinkDB
All DBs
Position
X:complement(5318928..5322696)
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AA seq
941 aa
AA seq
DB search
MDADKQLERQLEKELDEMPAEDLDDDAYDEYDLIVIPDQGKGSPQQGHSESPQQEEEHKS
EELRQRSRPTWPPSSAGGDMTTIELISSDDEPSVEETEGGNAAGRGRARNDSSSSSDDVG
VIEGSELESNSEVSSDSDSDSDNAGGGNQLERSYQELNALPSKKFAQMVSLIGIAFKLND
LEKIESSVLELQNLATVPAHVWLKYLKARLVVTQTDEERKAFEEQCAKALGYYYSIPLSE
YVVNYLVDQGNVQNHVLWAKLLADYDVERPDFGDKLRSLISTITDENEAAAFVEMLQKHC
VTWTCNVEQRQMIKSVVDKFKQHLDETTRGWDWSEQHKAHVYDVETLSLDDDLKNAVIRF
IFERSVAKFPIVDVLWLSYIEFIQFEGVTVPENEDENEVTAEMVAKRAKRLGKGFLRNTE
LDLANRGVRSHPSVQLNHRFLDLMERSDFELAEVDEEIRLILQRIVTDMDMTVELHLDYL
AYRIRNTNASDEQQVASLRAAFNHAWEELTVLYGDQADTRYEVLQLWAQVEYTQLGSPDN
GREIWRQIMGYPGSSIRGLLWLNFAQMESEYNGGHGTRDVLRKALSQPVLENGLMVQEFF
RRYERCYGTYESIAACQALDLPVEYVKPRSRIKPNSQSAYPRQQKLKPRQQQQQTNREPL
NREQRRRQAHEQQQQQQQQQKHGIKKSRTEPSGGATSPPSKVKGPANAEAKESNFKYSPN
MEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRA
VAGRDGCLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQEVAAKKLRL
LLPEPGDISSTSASVDVAIKREANGEEQKGDVQERDEQKGEEQKGEEQKGEEPKGEEQKG
DDQIGEEQSGVEQKGDEKKEEEMPAAVPKSNDDFRKLFLKD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacaagcagctggaaaggcagctggagaaggagctggacgagatgccggca
gaggatttggacgacgatgcgtatgacgagtatgatctgatcgtgatacccgatcagggc
aagggctcgccgcagcaggggcacagtgagtcgccgcagcaggaggaggagcacaagtcg
gaggagctgcgccaacgatcgcgcccaacctggccaccgtcgtccgccggcggggatatg
accaccattgagttgatctcatcggacgacgagccgtcagtggaggagactgagggaggc
aatgccgctggccgtggcagagcgcgcaatgattccagcagcagtagcgatgatgtgggc
gtgatcgaaggctcggaattggaatcgaacagtgaggtgtccagtgacagtgacagtgat
agcgacaacgctggcggcggaaatcagctagagcgctcgtatcaggagctgaatgcgttg
cccagcaaaaagtttgcccaaatggtctcgctcattggaatcgcattcaaactgaatgat
ctggaaaagatcgagtcatcggtgctggagctgcaaaatttggccactgtgccggctcac
gtgtggctgaagtatctaaaggcccgcctggtcgtcacccaaacggacgaggagcgcaag
gcattcgaggagcagtgtgccaaagcgttgggctactactacagcataccgctgtccgaa
tacgttgtcaactacctggtggatcagggcaacgtacagaaccatgtgctgtgggccaaa
ctgctggcggactacgacgtggagcgtccagactttggcgacaagctgcgttcgctgata
tcgacaattacggacgaaaatgaggctgccgcctttgtggaaatgctgcaaaagcactgc
gtcacctggacgtgcaacgtggagcagcggcagatgatcaagtccgttgtggacaagttt
aagcaacatctggacgagacaacgcgtggttgggattggtctgagcaacacaaggctcat
gtctacgatgtggagacattatcccttgacgatgacctcaaaaacgctgtgatccgtttc
atattcgaacgctcggtggccaagtttcccattgtcgatgtgctctggttatcctacatt
gagttcattcagttcgaaggcgtcactgtgccggagaatgaggatgagaatgaggtaacc
gccgaaatggtagccaaacgggccaaacgcttgggcaaaggttttctgcgcaacacggaa
ctcgatttggccaatcgtggtgtgcgcagtcatcccagtgtacaattgaatcatcgtttc
ctcgacctaatggagcgctcggactttgagttggcggaagtggatgaagagatacgtctc
atattgcagcgcattgtgaccgacatggatatgaccgtggagctgcatctggactatctg
gcctatcgtattcgcaacaccaatgccagcgatgagcagcaggtcgccagtctgcgtgcc
gccttcaatcatgcttgggaggagctaaccgtgctctacggcgaccaggcggacaccagg
tacgaggtgctgcagttgtgggcccaagttgagtacacgcaactggggagtccggacaat
ggccgtgagatttggcgccaaataatgggctatccgggcagctcgatacgcggcctgctc
tggctgaactttgcccagatggaaagcgaatacaatggtggccacggcacacgcgatgtc
cttcgcaaagctctctcgcagcccgtcctcgagaatggccttatggtgcaggagtttttt
cgccgctatgaacgttgctatggcacctacgagtccattgccgcctgccaggccctcgat
ctgcctgtcgagtatgtgaagccgcgttcccgcattaagcccaactcacagtcggcttat
cctcgccagcagaagcttaagccgcgccagcagcagcaacaaacgaatcgtgagccactg
aatcgcgagcagcgacgtcgccaggcgcatgagcaacaacagcaacagcagcagcagcag
aagcatggcattaagaagtccagaaccgagccatctggtggagctacgtcaccgccatcg
aaagtcaaggggccagcgaatgcagaggccaaggaatcgaactttaagtattcgcccaac
atggaaatcaataagatctttgtaagaaatctgcatcccgcttgcagcaaggaggagctg
cacgaactcttctcgcctttcggcaccatcaaagatgtgcgcctggtgcacaagctaaac
aagcagttcaagggcattgcatacgttgagttcgagaagccgggcgaggcgcaacgagca
gtggctggacgagatggttgtctattcaagggcatgaatatctctgtggccatttcaaac
ccaccgccgaggggcacatcagctgtcaagccaagtgtggcgcccaagcgacgtgtgccc
acctcgcttatacccacgactctggtgcgccaagaggtggctgccaagaagctgcgcttg
cttctgcccgagccgggggacatatcatccacttcggcatccgtcgacgtggccatcaag
cgcgaggctaatggagaggagcaaaaaggagatgttcaagaacgagatgagcaaaaagga
gaggagcaaaaaggagaggagcaaaaaggagaggagccaaaaggagaggagcaaaaagga
gatgatcaaataggagaggagcaaagtggagtggagcaaaagggagatgagaaaaaagaa
gaggagatgccagctgctgtgcccaagtcaaacgatgactttcgcaagctatttctcaag
gattag
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