KEGG   Drosophila melanogaster (fruit fly): Dmel_CG33505
Entry
Dmel_CG33505      CDS       T00030                                 
Symbol
U3-55K
Name
(RefSeq) U3 small nuclear riboprotein factor 55K
  KO
K14793  ribosomal RNA-processing protein 9
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dme03009]
    Dmel_CG33505 (U3-55K)
Ribosome biogenesis [BR:dme03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    Dmel_CG33505 (U3-55K)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_SCAP WD40_like Beta-prop_Vps41 Beta-prop_Nup120_160 KNTC1_N Beta-prop_HPS5 Beta-prop_SPT8 RMC1_N Zn_Ribbon_Topo
Other DBs
NCBI-GeneID: 3346176
NCBI-ProteinID: NP_001014529
FlyBase: FBgn0053505
UniProt: Q8MSW9
LinkDB
Position
2R
AA seq 484 aa
MSSSFFLKPGAKGTKKRKNPAATTKGKPLKKGGKPGKSTPAAGGPVPKKQRRPKEEDEEI
ASDDEEYNSDLGGDDNTLAFSSDEGEEETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQ
SVEQRLQTEYLDSVGKLRRNIAGSLKACESSRILKHKLHHTPICALALSPDGKFLYTGAK
SQFLLKWCTETGKVLEKSDVLSHREEPETGKKRRSHVISICLSSDMKYLALAEGGPHIQI
WCPQTMKHIKTLKGHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTA
VTSIDALSRERAITAGGSDCSLRIWKITEESQLIYNGHKDSIECVKYINDEHFVSGGMDG
AIGLWSALKKKPICTTQLAHGVGENGVANWITAIAVVVNTDLVATGSCDGCVRLWQTNPN
ARKMNLIQSISIAGFINGLAFNADGSKLFVATGQEHRLGRWWRLKEAKNQVVVLDVKLQS
AASS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcgtcctctttcttcctcaagccaggcgccaagggcaccaagaagcgcaagaatccc
gcagcaacaacaaaaggaaaaccgcttaagaaaggcggaaaaccgggtaaatcaacgccc
gcggctggtggaccagtgccaaagaagcagcgccgtcccaaggaggaggacgaggagata
gctagcgacgatgaggagtacaacagcgatctgggcggcgatgacaacaccttggcattt
tcatccgacgagggcgaggaggaaacgccgcaggacaagcgcctgcgtctggccaaacag
tatctgtcggagatcgagaagcaagaggcggaacgcgccgaggatcgggagctggcccaa
agcgtggagcagcgcttgcaaacggaatacttggatagcgtgggcaaactgcgccggaac
attgctggcagcctgaaagcctgcgaatcgagccgcatcctcaagcacaaactccaccac
acgcctatctgtgcccttgcactcagtccggatggtaaattcctctacacgggagccaaa
tcgcaattcctacttaagtggtgcacggaaacggggaaggtgctggagaaatcggacgtg
ctgtcgcatcgcgaggaaccagaaacgggcaagaaaaggcgatcgcatgtcatcagcata
tgcctgtcctcggacatgaagtatctggccttggccgaaggtggtccacacattcaaatt
tggtgtccccagacgatgaagcacattaagactcttaaaggccaccgggatagtgtggca
ggtctggtctttcgcaaaggcacacatgacttgtactcggcagccaaggatcgatcggtg
aaaatctggtccctggatgagatggcctatgtggagagtttattcggtcaccaaacggca
gtaactagcatagatgcactgagtcgagagcgcgccattaccgctggcggttcggattgc
tccttgcgcatttggaagatcacagaggaatcgcagctgatctacaatggacacaaagat
agcattgagtgcgttaagtacatcaacgatgagcattttgtgtctggtggcatggatgga
gcaatcggtttatggagcgctttgaaaaagaagcccatttgtacaacgcaactggcgcac
ggagtgggcgagaatggcgtggccaactggataaccgccattgctgtggtggtcaacacg
gatttagtggcaacaggttcttgtgacggttgcgtccgtctttggcagactaatcccaac
gcgcgtaaaatgaacctaatccagagcatatccatcgccggcttcatcaacggactggct
ttcaatgccgatggcagcaagctgtttgtggccaccggacaggagcaccgcctgggtcgc
tggtggcgactcaaggaggcaaaaaaccaagtagttgtactcgacgttaagttacagagc
gcggccagcagttag

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