Drosophila melanogaster (fruit fly): Dmel_CG34407
Help
Entry
Dmel_CG34407 CDS
T00030
Symbol
Not1
Name
(RefSeq) Not1, isoform C
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG34407 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG34407 (Not1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dmel_CG34407 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Dmel_CG34407 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
TrpP
Motif
Other DBs
NCBI-GeneID:
5740252
NCBI-ProteinID:
NP_001097242
FlyBase:
FBgn0085436
UniProt:
A8DY81
LinkDB
All DBs
Position
2R
Genome browser
AA seq
2505 aa
AA seq
DB search
MNVESQLKTPPTHIRNLVKHVNKRNFNESSEQINQFVKEHGLEADRSSLRHLFSVINFSD
LVPSVTVQLQAKLLGIQLERQLHSSSFVSNICYAFDQFFASNQKSLKPVAVADLVGQVAR
LTGINKVCECVFALALTHSSYTELKHSARNNLKGSLSELIDSYLGNKGTGPADSGLREIS
FDLLQYLLCCLSEYVQPQVEAQFLIKLREEFPRQAVPLVLAPFLYGSTTATIAGAGASET
DAEAEATTNSNSSSFEADALNEVGIEDIYDHLSEIIFTNQGKNNIMDTSWINLILEIGYE
FTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVNLPTPANFWPGQGQ
GGGSNSSGSSQTQITPQQQNPGSSNNNDGSDGNSSSDKKDKKETTEATQTWKPDVFVQAL
KEVVPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFPHPECIYRHWANTEG
QLSLIATMLKNPDLFSFADFVFSQPALDVLKTAPDADNKEISSWKSLHLVEVLLSIADKG
YYTQVHELFKFPAQNCPDVLFLALLNTSPPMTPLRQDLFNQLIPTFLGNHPNSNVILASA
WSSNNFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSALLNARSFLFIIDLA
CLASRREYLKLEKWLTDKIREHGEPFMQAIIKVLHRRCPQVINAKVPEDQLPPKQAQLLP
ETVTTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANKARAQQQQQPGLVPPPPPTILR
GHRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNLAGLNLSGPNGAFNFGNM
LTSPSRLMTPGANPYPLNLMQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTAPNPNNPV
MADLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCML
RNLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLY
YFGVTALDRFRTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVEYGMHGQEPPPQKLIGLSN
TIPSAISSGPGTEPIYRNSSMLGNMPAATPGSGPKSNAAVSHATRMKSIANATNIDTLLV
ANQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPWLAQYLVLKRASM
EFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVINFSDRSLLKNLGHWLGM
MTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKSRIFRSPNPWTMG
IMYVLAELHQEPDLKLNLKFEIEVLCKTLNLELAKLRQVIYLKDPNRTHRIEEQMSQPKP
KQLEPVASAPALPREQQSPAQPPPPPQQQQPPQQQVPPPPSSADVDAQNAAAMMMAAGGA
NSTPGSVSSPNLPTDSSQVALPPPEPRYSYVDVNVSNFQLIGQQLVLPPNTPFLHANPGI
KHMVVNAVERTITDWLQPIVDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLA
AGMAMITGKDEIARAISQNLHKALLSGLNGMPSMAEIQAAAMQLASENVELVCAFIQKTS
AEKAAAEIDRRLSTDFETRKIAREEGNRFVDAQILTYQQERLPEAVRIKVGAAPATLYAV
YSEFARSIPGFQQMSDRDIALFVPKPTDLSQPNVFANDDSMVYGELASKMEAFMNTAIGV
PTLQIQASKMHMLLNALIATRRLRDQESAFNLLTRAVEGLTEGLVNMHENMEQMKMYQNI
HLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARALITSHFVNLNQFDGMLRDC
MDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLGRLTQHRHRYPECIVNAI
DTLWSGNFNSSSDYSPFNGNDRYLSGASHYIHSGMHHVRSCDTDDPPGLQEKTEFLLKDW
VALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTDVVYRMFAEPS
LPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTLIKDHEMRG
VSFQQVGYHRFFMMLFMELCTADVILESLMHSIVSAFAYTYHLLNPSVAPGFCFAWLELI
SHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVL
LHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAP
KVLSSYIMNIQPANFKKDLDSYLKARAPVTFLSELRGHLQVTSEPGTRYNMALMNALVMY
VGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHT
HYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHD
FVHCAPEITKLFESVARSCLAKSNVTQQLNMPVVDGEGQEVATIN
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagagccaactgaagacaccgccaacgcacattcgaaatctggtcaagcac
gtgaacaagcgaaattttaatgagagcagcgagcaaataaatcagttcgttaaagagcac
ggcctggaagcggatcgcagcagcctgcgccacctgttctccgtgatcaacttcagcgat
ctcgtgccatcagttacggtccagctgcaggcgaagctcctgggcatccagttggagcgt
cagcttcacagttcatcgtttgtgtccaacatctgctacgcttttgaccagttcttcgcc
agcaaccagaagtccctgaagcctgttgcggtagcggatctcgttggccaggtcgcccga
ctgaccggcatcaacaaggtttgtgagtgcgtctttgccttggccttgacccactcctcg
tacacagaactcaaacattctgccaggaacaacctaaaaggtagcctcagcgaacttata
gactcttacttgggtaataaaggcaccggcccagccgacagcggtctccgggagatctcc
ttcgatctactgcagtatttgttgtgctgccttagcgagtacgtacaaccgcaggtggaa
gcacagtttttgatcaagcttcgtgaggagtttccgcgccaggcggtaccgctggttcta
gcgccgttcctttacggctcgacgacggcgacgattgcgggagcaggtgccagcgaaacg
gatgcggaggccgaagcgacgactaatagcaacagctccagtttcgaagcagatgctttg
aacgaggtgggaatcgaggatatttatgaccatttaagcgagataatattcaccaaccag
ggcaaaaataatattatggacacatcttggattaatctaatccttgaaatcggttatgaa
tttacatcgagcgttgaagagtgtaagaatcatttgtgttcccgcgagcgagaacgcgct
gagctccagtccaaagatgtcgccaagatcgtgggtcttatgtgccgacggcactcctcc
ctgctcgattgtaatgtgaatctaccgacgccggcgaacttctggcctggtcagggacag
ggcggtggcagcaacagcagtggctcttcgcagacacaaatcactccgcagcaacagaac
ccgggcagcagtaacaacaacgatggcagcgatggcaattcgtccagtgataagaaggac
aagaaggagacgacggaggccacgcaaacttggaagccagatgtctttgtgcaggcgctc
aaggaggtggtgcctcagctcaactggaaggacgtgtgcatggaacttgatcatcccgag
ttcgtgctgaaggatcgcatcggtttggagcttttgctcaccatccttcggctggccact
ggctctaacatatttccacatccagaatgcatttaccgtcactgggcaaacacggaaggt
cagctgtcgcttatcgcgacaatgctgaagaacccggatctcttttccttcgccgacttt
gtatttagccagccagcgttggatgtgcttaagacggctccggatgcggacaataaggag
atctcgtcctggaagtcgcttcacctggtggaggtgctgctctccattgcggacaaggga
tactatacgcaggtccatgagctattcaagttcccagcgcagaactgtcccgatgtgcta
tttttggccttattgaacacaagtccgcctatgacgccactgcgtcaggatctgtttaac
caactgataccaacgttccttggcaaccatcccaactcgaacgtgatcttggccagcgcc
tggagctcgaacaacttccaacttcgttccaatatcatgaatgctatgtccgagtggtat
ctccgaggcaatgagttcgatcaggtgaaactgtcgcgcatcctggatcttgcccaggat
ttaaaagcgctatcagcgctgctcaacgcccgttcatttttattcattatcgacctggct
tgccttgcctctcggcgcgagtacctgaagctggaaaagtggcttaccgataaaattcgc
gaacatggagagccttttatgcaggctataatcaaggttctgcaccgccgctgcccgcag
gttatcaacgcaaaagtgccagaggatcagctgcctcccaagcaggcgcagcttttgccc
gagacagttaccaccatgatcaactgtctgcaaacgtgcatcaataactgcatgcagccg
gagatggtcgaagtcatcatgcaaatgaccgcgaacgtggcgattatggctaacaaggcg
cgtgcccaacagcagcagcagccaggattggttccgccgcctccaccaacaattctgcgc
ggccatcgtggtatggatctgcctggaggcatagtccctccgccaccgcagcaaccgttc
tccggaaacctcaacgcgcagatgtttggaccaggaatggatccgctaacgaatatgtcc
aacaacttagccggcctcaacctcagcggcccgaacggagcatttaattttggaaacatg
ctaacttctccatcgcgtctgatgactccgggagccaatccctatccgctgaacctcatg
cagatgccgcaggctccgccaccacccaacgtaggaaacctaggccgcatgctgccaggg
ggtccacaacagcagactccaacgccgactccaacggcccccaatccaaacaaccctgtg
atggccgatctccagatacctgtgtcaaaggaagttgaagacgaggtcaactcatacttt
cagcgcatctacaaccaccagccgaatccaacgctgtccatcgatgaagtgctggacatt
ttgcaaagatttaaagagtcaagtaaccggcgcgagcaggaagtctttttgtgcatgctg
cgcaatctgttcgaggaatatcgctttttctgtcaatacccagagaaagagctacagatt
actgcgcagctatttggtggcattattgatcgtaacctggtgcccacttttgttgcactg
ggcctttctctgcgctgtgtcttggatgccctccgcaagcccgatggatctaagctttac
tatttcggtgtgacggcactggacagattcagaactcgattgcacacctacaacaaatac
tgcgagcatatccgctccattcctcacttctctgacttcccgccgcaccttattcagtat
gtggaatacggaatgcacggccaggagccgccgccgcagaagttgattggactcagcaat
acgattccttcggcgatatctagcggaccaggaacggaaccaatttacaggaatagctcc
atgttaggtaatatgcccgctgccaccccgggatcgggaccgaaatcaaacgctgctgta
tcgcatgccacgagaatgaagtccatcgccaatgccaccaatatcgacacacttttggtg
gccaaccaggaagagaaagtgactgtgccaccagagcctgtgcaggacaaaactgccttt
attttcaacaacttgagccagctgaacataccgcagaagtgcgatgagataaaggagatt
atgaccaaggagtattggccgtggctagcgcaatatctggtcctcaaacgcgcatcaatg
gagttcaacttccacacactatattacaactttttggatgcccttaaaaacggcgagatc
aaccgattcgtaaccaaagagaccctacgcaacatcaaggtactcttgcgctccgataag
ggagttattaatttctccgatcgaagtctgttgaagaacctcggacactggttgggcatg
atgaccttaggtcgcaatcgccccatcctgcagttggatctggatcttaaatcccttttg
gctgaggcttaccacaagggccagcaggaactgctttttgtggttcctttcgtagccaag
atccttgagtcatccgccaagtctcgcatcttccgatcgcccaatccatggacaatgggt
atcatgtacgtgcttgctgagcttcaccaggagccagaccttaagctgaacctgaagttt
gaaatcgaagtactctgtaaaacacttaatctggagttggccaagttgcgacaagtgatc
tacctgaaggatcccaatcgaactcaccggattgaagagcagatgtcgcaaccaaaaccg
aaacaacttgagccagtggcttctgcgccagctctaccgcgtgaacagcaatccccggca
caacctccgccaccaccacaacagcagcaaccaccgcagcagcaggtacctccaccgcca
tcctctgcggacgtggacgctcaaaatgcggccgctatgatgatggcagcgggcggagct
aatagtactcctggatcggtatcttcgcccaatctacccaccgattccagccaggtggca
ctaccgccaccagagccgcgctattcatacgtggacgtaaacgtgagcaacttccagctt
attggtcagcagttggtactgccacccaatactccgttcctgcacgccaatcccggaatc
aaacacatggtcgtcaacgccgtggagcgcacgataaccgactggttgcagcctattgtg
gaccgaagcatccgcattgcctgtgccaccaccgagcagatcatccgcaaggacttcgcc
ctggatgctgacgagaaccgaatgcgcactgccgctcatcagatggtacgaaaccttgcc
gccggcatggccatgattaccggtaaggatgagatagcgcgtgctattagccagaatctg
cacaaggccttgctgtcgggtctaaatgggatgcccagcatggctgagatccaagctgct
gctatgcagttagccagcgaaaatgttgagctagtttgcgctttcattcagaaaacatct
gctgaaaaggcagccgcagagatcgataggcgtctaagcaccgatttcgagaccagaaaa
attgctcgtgaagagggcaaccgctttgtggacgcccagatcctcacctatcaacaggag
cgtcttccagaagcagtgcgcatcaaggtgggcgcggctccagctacactttatgctgtg
tactcggagttcgctagaagcatacctggcttccagcagatgagcgatcgcgatattgcc
ctgtttgtgcccaagccgacggatttgtctcagccaaatgtgtttgctaatgatgatagc
atggtatacggggaactggctagcaaaatggaggccttcatgaacacggcaatcggagtg
ccgacactccagatccaggctagcaagatgcacatgctactcaacgccctgatagcgacg
cgtcgactgcgtgaccaagagtctgcctttaatctgctgacccgcgcggtcgagggtttg
accgaaggattggtcaatatgcatgaaaacatggagcaaatgaagatgtaccaaaacatc
catctccgtatccttggcttgctgaacaatagtttcggtgctccaaacacagagcgagcg
gtaacaaagtgtttcttcgatatccgagaggaggtgcgatataacgtggaggcagctcgc
gctttgattacgtcgcactttgtcaatctgaatcagtttgacggaatgctacgcgactgc
atggacaacggaaacaattatgtggccatatcgttcggtatcgcactgctggagcgcctc
atcatggacgatcgagtgattaatattgtttcggacaacgaattcatggcaactgttgag
ctgctaggtaggctcactcagcatcgccatcggtatccagaatgcattgtgaatgctatt
gatacgctctggagcggaaactttaactcgagcagcgactacagcccgttcaacggcaat
gatcgttacttgtcgggagcctcccattacatccactccggcatgcatcacgtaaggtca
tgcgatacagatgatccgccgggcttacaagagaagacggagtttctgcttaaggattgg
gttgcactgtacacgcaacagaaccagcagtcaacgcgcgatgcacgcaacttcggtgca
tttgttcagaagatgaacacatatggtatcctgaaaacggacgacttgatcacccgtttt
ttccgccaggccacacacatttgcacggatgtggtgtacagaatgttcgccgagccgagt
ttaccaatcaaccaggccaaaaacaagatattccagtggatcgatgcgttcgtccatctg
attgcaatgctcgtgcgacactcaggcgaagcaggtaatccaaccaccaagatcaacctg
ttaaacaaggtgctgggcattgtgctgggaacgctgattaaggaccatgagatgcgtggc
gttagcttccagcaggttggctaccatcgcttcttcatgatgctgttcatggagctgtgc
acggccgatgtgattctcgagtccctgatgcacagtattgtgtcggccttcgcctacaca
tatcacttgttgaatcccagcgtggctccgggattctgctttgcttggttggagctcatt
tcgcatcgcgtcttcctgggccgcatcctggtccaaattcccgggcaaaagggctggcca
ctttacgctcagttgctgcaggacctttttaaatatcttgcgcccttcttacgcaacact
gagctcggcaaaccagtccagcttttgtacaaggggacgctacgtgttctgctcgttctg
cttcacgacttcccggagttcttgtgcgactatcattttgggttctgtgacaccatcccg
cccaattgcgtccagatgcgtaacatcatcctgtcggcgtttccgcgcaacatgcgcttg
cccgatcccttcacgcccaacctaaaagtggacatgctgtcggacagtagtaatgcgcct
aaggtgctcagtagctacattatgaacatccagcccgcgaactttaagaaggatttggac
tcgtacctcaaggcccgggcgccagttacttttctatcggaattacgtggtcacttgcag
gtgacaagcgagccaggaactcgttacaacatggcactgatgaatgctctggtcatgtat
gtgggaactcaggcgattgctttgatcagaaacaaaaactttgtgcccaacacctcgaac
atagcacacagcgcccacatggatatcttccagaatcttgctgttgacttggatacggag
ggtcgctatctgttcttgaatgcgattgcgaaccagttgcgctatcccaacagccacacg
cactacttcagctgtgcggtgctgcatctgtttgccgaggccaactcggaggcaattcag
gagcagatcactcgcgtacttctggaacgattgatcgtgaaccgcccgcatccttgggga
ctgttgatcacttttattgagctgatcaaaaatcccatctacaagttctgggaccatgac
tttgtgcactgtgcgccagagatcaccaagctctttgaatcggtggcccgttcctgtctg
gccaagtcgaacgtcacccagcagttgaacatgcccgtcgtcgatggcgagggccaggag
gtagccaccatcaactga
DBGET
integrated database retrieval system
