Drosophila melanogaster (fruit fly): Dmel_CG3931
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Entry
Dmel_CG3931 CDS
T00030
Symbol
Rrp4
Name
(RefSeq) Rrp4, isoform B
KO
K03679
exosome complex component RRP4
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG3931 (Rrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG3931 (Rrp4)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Dmel_CG3931 (Rrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Dmel_CG3931 (Rrp4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
37731
NCBI-ProteinID:
NP_001286771
FlyBase:
FBgn0034879
UniProt:
Q9W1M9
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All DBs
Position
2R
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AA seq
298 aa
AA seq
DB search
MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA
GVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPA
LVKRRKMHFHNLPCGASVILGNNGYIWISPTKGQEEEGGEGGFAQNLNEHVPRADREVIA
RLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQARLRDADE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacgcggcgatagatctggccctggaccgggtggactggcgcgacctggcc
gcgcagacggaggaacagccgagggtgtatacgccgggggaagtgctgatgccggaggcg
ggattcatgcgcggccacggaaccttcgtcgaggacgagaacatcaagtcctcggtggcc
ggggtgatccagaaggtcaacaagctgatctcggtgcgcccgcttaagagtcgctatgtg
ggcgagatcggggacgtggtggtggcccgcgtcagcgaggtgcaacagaagcgctggcga
gtggacaccaattcccggctcgactccatcctactgctctcctcggtgaatctgccaggc
ggagaactacgacggagatcggcggaggacgagcagatgatgcgacgatacttggacgag
ggcgatctcatctctgccgaggtccagaacatctttgaggagggctccctttcgctgtac
acgcgcagtttgaagtatggaaaactatcgcagggcatcctggtcaaggtgttccccgct
ctcgtcaagcgccgcaagatgcacttccacaacctgccctgcggcgcctccgtgatcctg
ggcaacaatggctacatctggatatcgccgaccaagggccaggaggaggaaggcggcgag
ggaggattcgctcagaacctgaacgagcatgtgccgcgcgcggatcgggaggtgatcgcc
cggctgaggaactccatcctcgcgctggccaagtgcaagctgatgatttacgacaccagc
atccagtacgcctacgaggagtccctgcgctacgaggcccacgagctgctccagcagaac
gccatctacgacatcggccagcagacgcaggctcgtctgagggacgcggacgagtag
DBGET
integrated database retrieval system