Drosophila melanogaster (fruit fly): Dmel_CG3936
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Entry
Dmel_CG3936 CDS
T00030
Symbol
N
Name
(RefSeq) notch, isoform B
KO
K02599
Notch 1
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme04320
Dorso-ventral axis formation
dme04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Dmel_CG3936 (N)
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
Dmel_CG3936 (N)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
EGF_3
NOD
Ank_4
EGF_2
Ank_3
Ank_5
NODP
cEGF
AIF_C
DUF4770
Motif
Other DBs
NCBI-GeneID:
31293
NCBI-ProteinID:
NP_001245510
FlyBase:
FBgn0004647
UniProt:
P07207
M9NE67
Structure
PDB
PDBj
LinkDB
All DBs
Position
X:3134870..3172221
Genome browser
AA seq
2703 aa
AA seq
DB search
MQSQRSRRRSRAPNTWICFWINKMHAVASLPASLPLLLLTLAFANLPNTVRGTDTALVAA
SCTSVGCQNGGTCVTQLNGKTYCACDSHYVGDYCEHRNPCNSMRCQNGGTCQVTFRNGRP
GISCKCPLGFDESLCEIAVPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGERCETKNL
CASSPCRNGATCTALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPCKYGGTCVNTHGSYQ
CMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSYECKCPKGFEGKNCEQNYDDCLGH
LCQNGGTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVCQNGATCTNTHGSYSCIC
VNGWAGLDCSNNTDDCKQAACFYGATCIDGVGSFYCQCTKGKTGLLCHLDDACTSNPCHA
DAICDTSPINGSYACSCATGYKGVDCSEDIDECDQGSPCEHNGICVNTPGSYRCNCSQGF
TGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQCEIDIDECQSNPCLNDGT
CHDKINGFKCSCALGFTGARCQINIDDCQSQPCRNRGICHDSIAGYSCECPPGYTGTSCE
ININDCDSNPCHRGKCIDDVNSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDRVGS
YYCQCQAGTSGKNCEVNVNECHSNPCNNGATCIDGINSYKCQCVPGFTGQHCEKNVDECI
SSPCANNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRCEDGINEFICHCP
PGYTGKRCELDIDECSSNPCQHGGTCYDKLNAFSCQCMPGYTGQKCETNIDDCVTNPCGN
GGTCIDKVNGYKCVCKVPFTGRDCESKMDPCASNRCKNEAKCTPSSNFLDFSCTCKLGYT
GRYCDEDIDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGT
CLDGIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQ
TNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPCLNGATCHEQNN
EYTCHCPSGFTGKQCSEYVDWCGQSPCENGATCSQMKHQFSCKCSAGWTGKLCDVQTISC
QDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEIDECQSQPCQNGGTCRD
LIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICEINK
DDCKPGACHNNGSCIDRVGGFECVCQPGFVGARCEGDINECLSNPCSNAGTLDCVQLVNN
YHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHHCICNNGFYGKNCELSGQDCD
SNPCRVGNCVVADEGFGYRCECPRGTLGEHCEIDTLDECSPNPCAQGAACEDLLGDYECL
CPSKWKGKRCDIYDANYPGWNGGSGSGNDRYAADLEQQRAMCDKRGCTEKQGNGICDSDC
NTYACNFDGNDCSLGINPWANCTANECWNKFKNGKCNEECNNAACHYDGHDCERKLKSCD
SLFDAYCQKHYGDGFCDYGCNNAECSWDGLDCENKTQSPVLAEGAMSVVMLMNVEAFREI
QAQFLRNMSHMLRTTVRLKKDALGHDIIINWKDNVRVPEIEDTDFARKNKILYTQQVHQT
GIQIYLEIDNRKCTECFTHAVEAAEFLAATAAKHQLRNDFQIHSVRGIKNPGDEDNGEPP
ANVKYVITGIILVIIALAFFGMVLSTQRKRAHGVTWFPEGFRAPAAVMSRRRRDPHGQEM
RNLNKQVAMQSQGVGQPGAHWSDDESDMPLPKRQRSDPVSGVGLGNNGGYASDHTMVSEY
EEADQRVWSQAHLDVVDVRAIMTPPAHQDGGKHDVDARGPCGLTPLMIAAVRGGGLDTGE
DIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANCQ
DNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA
DADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAC
KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHVPRSPQMLSMTPQAMIGSPPP
GQQQPQLITQPTVISAGNGGNNGNGNASGKQSNQTAKQKAAKKAKLIEGSPDNGLDATGS
LRRKASSKKTSAASKKAANLNGLNPGQLTGGVSGVPGVPPTNSAAQAAAAAAAAVAAMSH
ELEGSPVGVGMGGNLPSPYDTSSMYSNAMAAPLANGNPNTGAKQPPSYEDCIKNAQSMQS
LQGNGLDMIKLDNYAYSMGSPFQQELLNGQGLGMNGNGQRNGVGPGVLPGGLCGMGGLSG
AGNGNSHEQGLSPPYSNQSPPHSVQSSLALSPHAYLGSPSPAKSRPSLPTSPTHIQAMRH
ATQQKQFGGSNLNSLLGGANGGGVVGGGGGGGGGVGQGPQNSPVSLGIISPTGSDMGIML
APPQSSKNSAIMQTISPQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQLGGLEFGSAGLD
LNGFCGSPDSFHSGQMNPPSIQSSMSGSSPSTNMLSPSSQHNQQAFYQYLTPSSQHSGGH
TPQHLVQTLDSYPTPSPESPGHWSSSSPRSNSDWSEGVQSPAANNLYISGGHQANKGSEA
IYI
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgcagcgcagccgacgtcgcagtcgcgcaccaaacacttggatttgtttttgg
attaacaaaatgcacgccgttgcgtcgctgccggcgtcgctgcctctgctgctgttgacg
ctggcgtttgcgaatttgccaaacaccgttcgcggaactgataccgcgttggtggccgct
tcctgcacaagtgtcggttgccagaatggcggcacatgcgttacacaactcaatggcaaa
acctactgcgcatgcgattcgcactatgtcggcgactactgtgaacaccgcaatccgtgc
aattcgatgcgttgccaaaatggtggcacctgtcaggtgacctttcgcaacggccgtccg
ggcatctcgtgcaagtgtcctttgggcttcgacgagtccctgtgcgaaattgcggtaccg
aatgcctgcgatcatgtgacctgcctcaatggaggcacctgtcagctaaagacactggag
gagtacacgtgtgcgtgtgccaatggctatacaggtgaacgatgcgagacgaagaatctg
tgcgcaagttctccctgccggaatggagccacctgcaccgctttggccggaagcagcagc
ttcacctgctcctgtccgccgggcttcaccggtgacacctgttcctatgacatcgaggag
tgccagtcgaatccgtgcaaatacggcggcacatgtgtcaacacccacggatcttaccag
tgcatgtgtcccacgggctacacgggaaaggattgcgacaccaagtacaagccctgctcg
ccatcgccgtgccagaatggcggaatttgccggtcgaacggtctgtcctacgagtgcaag
tgccccaaaggtttcgagggcaagaactgcgaacagaactacgacgattgcctgggacat
ctttgccagaacggaggaacctgcatcgatggcatctcggactacacctgccgctgtcca
ccgaacttcacgggcagattctgccaggacgatgtggacgagtgcgcccaacgggatcat
ccggtgtgccagaacggagccacctgtacaaacactcacggatcgtacagctgcatctgc
gtgaatggctgggcgggcttggactgcagcaacaacacggatgactgcaaacaggcggcc
tgtttctacggagccacgtgcatcgatggcgttggcagcttctattgccagtgtacgaag
ggcaagacgggtctgttgtgccacctggacgatgcctgtacctcgaatccctgccatgcg
gacgccatttgtgacacgagtccgataaacggctcctatgcctgttcctgtgccaccggc
tacaagggcgtggattgttcagaggacatagatgaatgcgatcagggatcaccgtgcgaa
cacaatggcatatgcgtgaacacaccgggcagctacagatgcaattgctcccagggcttt
acgggtccgcgctgcgagacgaacatcaatgagtgcgaatcgcatccatgccagaacgag
ggatcttgcctggatgatccgggaacgttccgatgcgtctgtatgccaggattcacgggc
acacagtgcgaaatcgacattgacgaatgccaatcgaatccctgcttgaacgatggaact
tgccacgacaagatcaatggctttaaatgcagttgtgccctgggctttacgggcgcacga
tgtcaaatcaatatagacgactgtcagtcgcaaccatgccggaatcgtggcatctgtcac
gactctatagcgggctacagctgcgaatgtccgccgggatatacgggcaccagttgcgag
atcaatatcaacgattgcgattcgaatccctgccatcggggcaagtgcatcgacgatgtg
aacagtttcaagtgcctctgtgatcccggctacacgggctacatatgccagaagcagatc
aacgaatgcgaatcgaatccgtgccagttcgatggccattgccaggatcgtgtgggcagc
tactattgtcagtgccaggcgggaaccagtggcaagaattgcgaggtcaatgtgaacgaa
tgccacagtaatccctgcaacaatggtgccacctgcatcgatggcatcaattcgtacaag
tgccagtgtgtgcccggttttacgggtcagcactgcgagaagaacgtcgacgagtgcatt
agcagtccgtgtgccaacaatggtgtctgcatagatcaggtgaatggctacaagtgcgag
tgtccgcgtggattctacgatgcccattgcctgagcgatgtggacgagtgcgcatcgaat
ccgtgcgtgaacgagggacgttgcgaggatggaatcaatgagttcatctgccactgtccg
ccaggatacacgggcaagcgttgtgagctggacatagacgagtgcagcagcaatccctgc
cagcatggtggcacctgttatgataagctcaacgccttcagttgccaatgcatgccgggc
tatacgggccaaaagtgcgaaacgaatattgacgactgtgtgaccaatccgtgcggaaat
ggaggcacctgcattgacaaggtcaacggctacaagtgcgtctgcaaagtgcccttcacg
ggcagggattgtgaaagcaaaatggatccctgcgccagcaatcgttgcaaaaacgaggcg
aaatgcacgccaagctcgaatttcctggacttctcctgcacctgcaaactgggctatacg
ggtcgctattgcgatgaggacatagacgaatgctcactgagttcaccctgtcggaatgga
gctagctgtttgaatgttcccggatcgtataggtgcctctgcaccaagggctatgagggc
agagattgcgccatcaatacggacgattgtgcctcgtttccgtgccagaacggtggaacc
tgtctggatgggatcggtgactatagctgcctgtgcgtggatggcttcgatggcaagcac
tgcgagacggacatcaatgagtgcttgagtcagccgtgccagaatggagccacgtgtagt
cagtatgtgaatagctatacctgcacctgtccactcggattctccggcatcaattgtcag
acgaacgatgaggattgcacggagagctcgtgcttaaacggtggcagttgcatcgatggc
atcaatggctacaactgtagctgtttggctggatattccggtgccaattgtcagtacaag
ttgaataagtgcgattcgaatccctgtttgaacggagccacctgccacgagcaaaacaac
gagtacacatgccattgtcccagtggctttacgggcaaacagtgttccgaatatgtggat
tggtgtggtcaatcgccgtgcgagaatggagcgacctgtagccagatgaagcatcagttt
agctgcaaatgctcggcaggatggacgggtaagctgtgcgatgttcagacgatttcgtgt
caggatgcagcagatcggaagggtctgagcctgcggcagttgtgcaacaatggcacgtgc
aaggattatggaaatagtcatgtgtgctactgctcccagggatacgcgggtagctattgc
caaaaggagatcgacgagtgccaatcgcaaccgtgccagaatggtggaacgtgccgagat
ctcatcggagcctacgaatgccagtgtcgccagggatttcagggtcagaattgcgaactg
aacatcgatgactgtgcaccgaatccctgccagaatggcggcacttgccacgaccgtgtg
atgaactttagctgcagctgtccaccgggaacgatgggcatcatatgcgagatcaacaag
gatgattgcaaaccgggagcatgccacaacaacggcagctgcatcgatcgcgttggaggc
ttcgagtgcgtctgtcagcccggttttgtgggtgcccgctgcgagggcgacatcaacgag
tgcctaagcaatccctgttcgaatgccggcacactggactgcgtccagttggtcaataac
tatcactgcaactgtcgacctggacatatgggtcggcactgtgagcacaaggtggacttt
tgtgcccagagtccgtgccagaatggtggcaattgtaatatccgacagagtggccaccac
tgcatctgtaataatggattctacggtaagaactgtgagctgagtggtcaggattgtgat
tcgaatccctgccgtgtgggtaactgtgttgtcgcggacgagggattcggctatagatgc
gagtgtccaaggggcacactgggtgagcactgcgagattgatacgctagacgaatgttcg
ccgaatccctgtgcccagggagctgcctgcgaggatttgctcggtgattacgaatgcctc
tgtccgagcaaatggaaaggcaaacgctgcgatatctatgatgccaactatccgggatgg
aatggcggttcgggatccggaaatgatcgctatgccgctgatttggagcaacaacgtgcc
atgtgcgataagcgaggttgcaccgaaaagcagggcaacggcatttgcgattccgattgc
aatacgtatgcctgcaactttgatggaaacgattgctcactgggcatcaatccgtgggcc
aattgcacggccaacgagtgctggaacaaattcaagaacggcaaatgcaacgaggagtgc
aacaatgctgcctgccactacgatggtcacgattgcgaacggaaattgaagagttgcgat
agccttttcgatgcctactgccagaagcattacggcgatggtttctgcgactatggatgc
aataatgcggaatgcagttgggacggactcgactgtgagaacaagacccagtcaccggtt
ttggccgagggtgccatgtccgtggtgatgctaatgaatgtggaggcattccgcgagatt
caggctcagttccttaggaatatgagccacatgctgcggacaacggtgcggttgaagaag
gacgctcttggtcatgacatcattatcaattggaaggacaatgtgcgcgtgccggagatc
gaggatacggactttgcgagaaaaaacaagattctgtacacccaacaggtccatcagacg
ggcattcaaatctatttggagattgacaatcgcaaatgcaccgaatgctttacgcacgcc
gttgaggcagccgaatttctggctgccacggcggccaaacatcagctgcggaacgatttt
cagatacacagtgttaggggcatcaagaatcccggcgatgaggacaatggtgagccgccg
gcgaatgtgaaatacgtaattactggcattatactggtcatcattgcattggccttcttt
ggcatggtcttgagtacgcaaagaaagcgggcacatggcgtcacctggttcccggaggga
ttccgtgcaccggcggcggttatgtcgcgacgtcgacgtgatccacacggccaagagatg
cggaatctcaacaagcaggtggccatgcaatcgcagggtgttggccagccaggtgctcat
tggtccgacgatgaatcggatatgccgttgcccaagcgacagcgcagtgatcccgtttcc
ggtgtcggtctgggcaacaatggtggctatgccagtgatcatacaatggtcagcgaatat
gaggaggctgatcagcgggtctggtcgcaggcccatctggatgtggtcgatgtgcgggcc
ataatgacaccgccggcgcatcaggatggtggcaagcacgatgtggatgcacgtggacct
tgcggactgactccgctaatgattgctgccgtacgaggcggtggcctggacactggcgag
gatatcgagaacaatgaggacagtactgcccaggtgatatcggatctattggcacaggga
gccgagttaaatgccacaatggataaaacgggcgagacatcattgcatttggcagcacgt
tttgctcgagcagatgccgccaagagattattggacgccggtgcggatgccaattgtcag
gataacacgggcaggacaccgctgcacgctgctgtggccgccgatgccatgggtgtattt
cagatattgcttaggaatagggctaccaatctaaatgctagaatgcatgacggcacaacg
ccactaatactggccgctcgtctagccatcgagggcatggtggaggatttgatcacagcc
gatgcggatattaatgcagcggataattccggcaagaccgctctccattgggcagcggcg
gttaacaataccgaagcggtgaacattctgctaatgcatcatgccaatcgcgatgcccag
gacgataaggatgagacaccgctgtttctggccgcacgcgagggtagctatgaggcgtgc
aaggcgctgttggataattttgccaatcgcgagattaccgatcacatggatcgattgcca
cgcgatgtggccagcgagcgactgcatcacgatattgtcaggctgctggacgagcatgtg
ccgcgatctccgcaaatgctgagcatgacaccgcaggcaatgatcggatccccgccgccg
ggtcaacagcagccgcagttgatcacacagccgacggtcatttccgccggaaatggtggc
aacaatggcaatggcaatgccagcggaaagcagagcaaccaaacggccaaacagaaggcg
gccaagaaggccaaactaatcgagggcagtccggacaatgggctggatgccacgggcagt
ttgcgacgcaaggcaagttcaaaaaagacaagtgcggcctcaaaaaaggccgccaacttg
aatggcctaaatccgggccagctgacggggggagtgtcgggcgtgccgggtgtaccgcca
acgaattcagcggcacaagcagctgcagcggcagcggcagccgtggcggccatgtcccac
gaactggagggttcgccggtgggcgtgggcatgggcgggaatctgcccagtccgtacgac
accagttcgatgtactcgaatgcgatggccgcaccgctggcgaacggcaatccgaacacg
ggcgccaagcagccgccgagctatgaggattgcatcaagaatgcgcaatcgatgcaatcg
ctgcagggcaatggtctggatatgatcaagctggataattatgcctactcgatgggctcg
ccatttcagcaggagctgctcaatggccaaggactcgggatgaatggtaatggccagcga
aatggagtcggtcccggcgttctgcccggcggcctatgcggaatgggcggtctgagtgga
gccggcaatggaaatagccacgaacagggactgagtccgccgtactcgaatcagtcgccg
ccgcattcggtgcagagcagcctggcgctatcgccccacgcctacttgggctcgccatcg
ccggccaagtcgcgacccagtctacccacctcgcccacccacattcaggcgatgaggcat
gccacacagcagaagcaattcggtggcagtaatctgaatagtttgctgggcggtgccaat
ggcgggggcgtggtcggcggaggaggaggtggtggtggtggtgttggccaggggccacaa
aactcacccgtaagcttgggaatcatctcgccgacgggcagcgatatgggcatcatgctc
gccccgccccaatcctcgaagaatagtgcaataatgcaaacgatatcaccccagcaacag
cagcagcagcagcaacagcaacagcagcaacatcagcagcagcaacagcagcagcaacag
cagcagcagcaacagcagcagcaactcggaggcctggagttcggttcagcgggcttggac
ctgaatggattttgtggatctccggactcatttcactcgggtcaaatgaatccgccctcg
atacaaagttcaatgtccggctcatcgccgtcgaccaatatgttgtcgccgtcgtcgcag
cacaatcagcaggccttctaccagtacctaacgccttcgagccaacattccggcggccat
acgccgcagcatttggtccaaacgttggatagctatccgacgccctcgccggagtcacct
ggccactggtcctcctcgtcgccgcgatcgaattccgattggagcgagggcgttcagtcg
ccggcggcaaataatctttacatatccggtggccatcaggctaacaagggttccgaggcc
atctacatttga
DBGET
integrated database retrieval system
