Entry |
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Symbol |
Mtr4
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Name |
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KO |
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Organism |
dme Drosophila melanogaster (fruit fly)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dme00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG4152 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dme03019]
Dmel_CG4152 (Mtr4)
03041 Spliceosome [BR:dme03041]
Dmel_CG4152 (Mtr4)
03009 Ribosome biogenesis [BR:dme03009]
Dmel_CG4152 (Mtr4)
03016 Transfer RNA biogenesis [BR:dme03016]
Dmel_CG4152 (Mtr4)
Enzymes [BR:dme01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmel_CG4152 (Mtr4)
Messenger RNA biogenesis [BR:dme03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Dmel_CG4152 (Mtr4)
Spliceosome [BR:dme03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Dmel_CG4152 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
Dmel_CG4152 (Mtr4)
Ribosome biogenesis [BR:dme03009]
Eukaryotic type
Pre-60S particles
Helicases
Dmel_CG4152 (Mtr4)
Transfer RNA biogenesis [BR:dme03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Dmel_CG4152 (Mtr4)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2L
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AA seq |
1055 aa
MDIEELFDCFDEVTPSVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSKGAEGD
DKGDVTEEPTKRLKQEASTVAVDDDNNADDEPTRTLDIDDSATLEALRTRIVTHLLDAPK
SCTHEVAAHPDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKT
VVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMT
TEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPN
ARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKEDNFTTAMA
VLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIYAM
QMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLPILK
ETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRA
GRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYM
LERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWI
TKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPLKAEPSVTIDVLLHVSE
AAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAK
KRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERIHRRYQDKVT
LQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELL
MTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVST
ECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQM
CQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL |
NT seq |
3168 nt +upstreamnt +downstreamnt
atggatatagaagagctgttcgactgttttgatgaagtgacgccgtcggtgccgccacca
gcacttaaccaggaggagaagccatcgggaagcagtgcctccaagaaaggaaataagcgc
caagcggatggcaccactgcatcgaaagaagctacatcctccaaaggagcggagggcgat
gacaaaggagacgtcactgaggagcccaccaagcgtctgaagcaggaggcgtcaacggtt
gcggtggatgacgataataatgcagatgacgaacccactcgtaccctcgacatagacgat
tccgcgactctggaggccctgcggaccaggattgtcacgcacttgttggacgctcccaag
tcatgcacccacgaggttgccgcccatcccgaccaggagtacatacccctaaagccgttc
agcggcgtgcctgcaaaggagtatcccttcgtcctcgatccgttccagcgccaggcgatt
ctgtgcattgacaacagccagagtgtgctggtttccgcccacacgtcagccggtaagacg
gtggtggcggagtatgccattgcaaaatcattggccgccaagcagcgggttatatacacc
actcccatcaaggctctgtccaaccagaagtttcgcgaattcaccgacgagtttaaggac
gtgggcttggtcaccggtgatgtgaccataaatccatcggcctcctgtttgatcatgacc
accgagattctgcgaaacatgttgtaccgcggtagcgagatcatgcgcgaggtgggctgg
gtggtcttcgatgagattcactacatgcgcgacaaggagcgcggcgtcgtctgggaagaa
acgctcatccttctgccggacaacgtgcgatatgtctttctttcggccaccattcccaat
gctcgacaattcgccgagtgggtctgccacctgcacaagcagccatgtcacgtggtctac
accgattatcgtcccactcctctgcagcactacatctttccggccggtggcgatggcatt
catcttatcgtcgatgaaaaggggcagttcaaggaggacaacttcaccacagcaatggca
gtgctggccaatgcaggtgaggccggcaagggagatcagaaaggacgccatgggggcatt
aagggaaccaatgccggacaaacgaatatctttaaaatagtcaagatgataatggagcgc
aattttgcaccggtcatcattttttcgttcagcaaaaaggactgcgagatctacgccatg
cagatggccaagttggacttcaacactcccgacgaaaagaaactagtggacgaagtgttc
aacaatgccatggacgtgctcaccgaggaggatcgtcgcctgccacaggtggaaaacgtg
ttgccgttgttgcgtcgcggcattggcatccatcacggcggtctgttgcccattctgaag
gagaccattgagattctgttcggcgaaggtctgatcaaggccttattcgccaccgaaacc
tttgcaatgggccttaatatgccggctcgaactgtgctgtttacggctccgcgtaagttc
gatggcaagaaattccgatggatcagctctggcgagtacatccagatggcgggacgtgcc
ggtcgacgtggattggatgacaagggcatcgtcattctcatgatcgatgaaaaagtttcg
ccggctgttggtcgtgacattgttcagggcaaggcagatcccatcaattcggccttccat
cttacatacaatatggtgctgaatctgcttcgtgtggaggaaatcaatccggaatacatg
ctggaacgcagtttctatcagttccaaaatcaagctgcactgcccggcctgcatgaccag
gtggagcagaagacgctggagctgaataagctgactatcaaggacgagcacaacattgcc
tcctaccatcacatacgctctcagctggatcaacacggcaagcagttccgtcaatggata
acgaagccgcaatacctattgcccttcctacagcctggtaggttggtcaaggtggccgcc
ggctcacaggagtacgattggggcattgtgctgaacttcaagaaacaagaccaaagccgc
aagaaccctttaaaggcggagcccagcgtcacgattgatgttttgctgcacgttagtgaa
gcggccgccaaaaccggcgacacggagccatgcaaaccgaacgaacgtggatgcatggag
gtggtgcccgtggcccacaccctcatcacccagatcagctcaatccgcgtgtacttcccc
aacgatctacgcagtgctgacaatcggcgagccgtgctcaagactatccaggaggccaag
aaacgattccccctgggaccaccggtcctcaatcccatcgatgacatgaacatcaaggat
cgagagttccgcgatattgtcaataccatttcccaatttgaaaagcgattggaggagcat
ccgctgcacaagtcaccggaattggagcgcatccaccggcggtaccaggacaaggtgacg
ctacaaaagcagctgcaagacctaaaggccgagctaaaggctgcccgcagtctgctgcaa
atggatgaactgaagcatcgcaagcgtgtgcttcggcgcatgggctactgcaagcctggc
gacgttatcgagttcaagggtcgtgttgcctgcgaactgagctcggcggatgagcttctc
atgaccgagatgatcttcaacggagtatttaacgacctcaccgctccgcaagccgtggct
ctactctcctgctttgtttgcgacgagaagtccagcgagtcggtgaaaagcgccacggag
ctatcgggcccactacgttcgatgcaggatctggcgcggcgcattgccaaggtgtccacg
gaatgcaaactcgatctggacgccgatacgtatgtggacaagtttaagcccttcctaatg
gacgtggtgctggcgtggtgcaagggctccagtttccttgccgtctgcaagatgaccgac
atcttcgaaggctccatcatccgctgcatgaggcgactggaggagcttctgcgccagatg
tgccaggcctcgaagaccattggcaacacggacctggagaacaagttctccgaaggaata
aggctgctcaagcgtgacattgtctttgccgcgtcgttgtatctgtaa |