Drosophila melanogaster (fruit fly): Dmel_CG4152
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Entry
Dmel_CG4152 CDS
T00030
Symbol
Mtr4
Name
(RefSeq) Mtr4 helicase
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG4152 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG4152 (Mtr4)
03041 Spliceosome [BR:
dme03041
]
Dmel_CG4152 (Mtr4)
03009 Ribosome biogenesis [BR:
dme03009
]
Dmel_CG4152 (Mtr4)
03016 Transfer RNA biogenesis [BR:
dme03016
]
Dmel_CG4152 (Mtr4)
Enzymes [BR:
dme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmel_CG4152 (Mtr4)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Dmel_CG4152 (Mtr4)
Spliceosome [BR:
dme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Dmel_CG4152 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
Dmel_CG4152 (Mtr4)
Ribosome biogenesis [BR:
dme03009
]
Eukaryotic type
Pre-60S particles
Helicases
Dmel_CG4152 (Mtr4)
Transfer RNA biogenesis [BR:
dme03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Dmel_CG4152 (Mtr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
48782
NCBI-ProteinID:
NP_524929
FlyBase:
FBgn0001986
UniProt:
Q9Y134
LinkDB
All DBs
Position
2L
Genome browser
AA seq
1055 aa
AA seq
DB search
MDIEELFDCFDEVTPSVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSKGAEGD
DKGDVTEEPTKRLKQEASTVAVDDDNNADDEPTRTLDIDDSATLEALRTRIVTHLLDAPK
SCTHEVAAHPDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKT
VVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMT
TEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPN
ARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKEDNFTTAMA
VLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIYAM
QMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLPILK
ETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRA
GRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYM
LERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWI
TKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPLKAEPSVTIDVLLHVSE
AAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAK
KRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERIHRRYQDKVT
LQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELL
MTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVST
ECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQM
CQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatatagaagagctgttcgactgttttgatgaagtgacgccgtcggtgccgccacca
gcacttaaccaggaggagaagccatcgggaagcagtgcctccaagaaaggaaataagcgc
caagcggatggcaccactgcatcgaaagaagctacatcctccaaaggagcggagggcgat
gacaaaggagacgtcactgaggagcccaccaagcgtctgaagcaggaggcgtcaacggtt
gcggtggatgacgataataatgcagatgacgaacccactcgtaccctcgacatagacgat
tccgcgactctggaggccctgcggaccaggattgtcacgcacttgttggacgctcccaag
tcatgcacccacgaggttgccgcccatcccgaccaggagtacatacccctaaagccgttc
agcggcgtgcctgcaaaggagtatcccttcgtcctcgatccgttccagcgccaggcgatt
ctgtgcattgacaacagccagagtgtgctggtttccgcccacacgtcagccggtaagacg
gtggtggcggagtatgccattgcaaaatcattggccgccaagcagcgggttatatacacc
actcccatcaaggctctgtccaaccagaagtttcgcgaattcaccgacgagtttaaggac
gtgggcttggtcaccggtgatgtgaccataaatccatcggcctcctgtttgatcatgacc
accgagattctgcgaaacatgttgtaccgcggtagcgagatcatgcgcgaggtgggctgg
gtggtcttcgatgagattcactacatgcgcgacaaggagcgcggcgtcgtctgggaagaa
acgctcatccttctgccggacaacgtgcgatatgtctttctttcggccaccattcccaat
gctcgacaattcgccgagtgggtctgccacctgcacaagcagccatgtcacgtggtctac
accgattatcgtcccactcctctgcagcactacatctttccggccggtggcgatggcatt
catcttatcgtcgatgaaaaggggcagttcaaggaggacaacttcaccacagcaatggca
gtgctggccaatgcaggtgaggccggcaagggagatcagaaaggacgccatgggggcatt
aagggaaccaatgccggacaaacgaatatctttaaaatagtcaagatgataatggagcgc
aattttgcaccggtcatcattttttcgttcagcaaaaaggactgcgagatctacgccatg
cagatggccaagttggacttcaacactcccgacgaaaagaaactagtggacgaagtgttc
aacaatgccatggacgtgctcaccgaggaggatcgtcgcctgccacaggtggaaaacgtg
ttgccgttgttgcgtcgcggcattggcatccatcacggcggtctgttgcccattctgaag
gagaccattgagattctgttcggcgaaggtctgatcaaggccttattcgccaccgaaacc
tttgcaatgggccttaatatgccggctcgaactgtgctgtttacggctccgcgtaagttc
gatggcaagaaattccgatggatcagctctggcgagtacatccagatggcgggacgtgcc
ggtcgacgtggattggatgacaagggcatcgtcattctcatgatcgatgaaaaagtttcg
ccggctgttggtcgtgacattgttcagggcaaggcagatcccatcaattcggccttccat
cttacatacaatatggtgctgaatctgcttcgtgtggaggaaatcaatccggaatacatg
ctggaacgcagtttctatcagttccaaaatcaagctgcactgcccggcctgcatgaccag
gtggagcagaagacgctggagctgaataagctgactatcaaggacgagcacaacattgcc
tcctaccatcacatacgctctcagctggatcaacacggcaagcagttccgtcaatggata
acgaagccgcaatacctattgcccttcctacagcctggtaggttggtcaaggtggccgcc
ggctcacaggagtacgattggggcattgtgctgaacttcaagaaacaagaccaaagccgc
aagaaccctttaaaggcggagcccagcgtcacgattgatgttttgctgcacgttagtgaa
gcggccgccaaaaccggcgacacggagccatgcaaaccgaacgaacgtggatgcatggag
gtggtgcccgtggcccacaccctcatcacccagatcagctcaatccgcgtgtacttcccc
aacgatctacgcagtgctgacaatcggcgagccgtgctcaagactatccaggaggccaag
aaacgattccccctgggaccaccggtcctcaatcccatcgatgacatgaacatcaaggat
cgagagttccgcgatattgtcaataccatttcccaatttgaaaagcgattggaggagcat
ccgctgcacaagtcaccggaattggagcgcatccaccggcggtaccaggacaaggtgacg
ctacaaaagcagctgcaagacctaaaggccgagctaaaggctgcccgcagtctgctgcaa
atggatgaactgaagcatcgcaagcgtgtgcttcggcgcatgggctactgcaagcctggc
gacgttatcgagttcaagggtcgtgttgcctgcgaactgagctcggcggatgagcttctc
atgaccgagatgatcttcaacggagtatttaacgacctcaccgctccgcaagccgtggct
ctactctcctgctttgtttgcgacgagaagtccagcgagtcggtgaaaagcgccacggag
ctatcgggcccactacgttcgatgcaggatctggcgcggcgcattgccaaggtgtccacg
gaatgcaaactcgatctggacgccgatacgtatgtggacaagtttaagcccttcctaatg
gacgtggtgctggcgtggtgcaagggctccagtttccttgccgtctgcaagatgaccgac
atcttcgaaggctccatcatccgctgcatgaggcgactggaggagcttctgcgccagatg
tgccaggcctcgaagaccattggcaacacggacctggagaacaagttctccgaaggaata
aggctgctcaagcgtgacattgtctttgccgcgtcgttgtatctgtaa
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