KEGG   Drosophila melanogaster (fruit fly): Dmel_CG43662
Entry
Dmel_CG43662      CDS       T00030                                 
Symbol
Polr2D
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03020  RNA polymerase
dme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dmel_CG43662 (Polr2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dmel_CG43662 (Polr2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG43662 (Polr2D)
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG43662 (Polr2D)
Transcription machinery [BR:dme03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Dmel_CG43662 (Polr2D)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Dmel_CG43662 (Polr2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 AAA_5
Other DBs
NCBI-GeneID: 14462484
NCBI-ProteinID: NP_001014633
FlyBase: FBgn0263757
UniProt: Q9VEA5 A0A1B2AK30
LinkDB
Position
3R
AA seq 139 aa
MSFMNPVDMVDEDAADLQFPKEFENAETLLISEVHMLLDHRKRQNESADEEQEFSEVFMK
TYAYTDSFRKFKNKETIMSARSLLMQKKLHKFELAALGNLCPEAPEEAKALIPSLEGRFE
DEELRQILDDIGTKRSLQY
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtcttttatgaaccccgtggatatggtggatgaggacgccgccgacctgcagtttccc
aaagagttcgaaaatgccgagacgctgctgatatcggaggtgcacatgcttctcgatcac
cgaaagcgacaaaacgaatccgccgacgaggagcaagagttctccgaggtcttcatgaag
acgtacgcctacacggatagttttcgaaagttcaaaaacaaggagaccataatgtctgcg
cgaagcttgctgatgcagaaaaagctgcacaaattcgaactggcggcactgggtaatttg
tgtccggaggcgcccgaggaggccaaggcgctgattccttcactagagggtcgcttcgag
gatgaggagctgcgccaaatactcgacgatatcggcactaaacgcagcttacaatactaa

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