KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5018
Entry
Dmel_CG5018       CDS       T00030                                 
Symbol
l(3)72Dn
Name
(RefSeq) lethal (3) 72Dn, isoform B
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Dmel_CG5018 (l(3)72Dn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dme03009]
    Dmel_CG5018 (l(3)72Dn)
Ribosome biogenesis [BR:dme03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Dmel_CG5018 (l(3)72Dn)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_EML_2 WD40_Prp19 WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 EIF3I Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_SCAP RMC1_N Nucleoporin_N WD40_like
Other DBs
NCBI-GeneID: 39774
NCBI-ProteinID: NP_001261930
FlyBase: FBgn0263605
UniProt: M9PFG1
LinkDB
Position
3L
AA seq 699 aa
MTNNAKKEPQQRGKHQVHNVRFYTIKPREIVSLAYSKSSKCLALSRATPVIELWNLEHAP
YLDRVIHLPTDSHVESIAWAGNRLFSVDLSGKLIEWDVIKLKQRYEHSPTGNALWSIDVN
PAETDIAIGSEEGHINILSIENDEITYKSLFNKQKGRVLCIKFDKTGTKLVTGTEGFVRI
WNVLKGTTLHTMTLSEKNVIVWSLQVLSDNTIIAGDSAGFVTVWDADNATQIDSTRVLDK
NVFALAVNNKEDRLVCSGMQPPLIRIFSKTKIKREESTSERWIKFLQRDAHKHYVKSLLV
IDDQIYSGGRDGILTITSSERMQAHLSQHAPFLKGSVASMAISKKLLLLRYPNSVHLWRL
GSVAPQGEDKKKPWALPVGHTEEQLLELPPQKLLQLNVKEHNFIQSAAISSDANWICYST
LKELRISRLKSDPLQVERLVDDLPEELQPASHIIFTKQGDLVLLNPQNNHLSWFTLEEDL
VTFKYTIDLSEKCKNTISHVVISSHGEYIVAASSDHIISVWKLHGKQYKHLLNLPRHRAG
TTALSMHEDYPRVVVAYANGQLVEYDLVNRIFTCETNEYLIPETRRHCINGISLDPQNRN
IFIVHTEGNLYVLERDQHLDPKELVSNSKSKKLSNGNRSSVDGGSKGLSLKTTLSRQVRL
HLVHVSRLSPNELVNVSISTNNLLAPLPPPYQRKKFGAS
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgacgaataatgcgaagaaggaaccccagcaaaggggcaagcatcaggtgcataatgtg
cgcttctacactataaagccgcgtgaaattgtcagcttggcgtatagtaaatcgagcaag
tgcctcgctctgagtcgtgcaacacccgtcattgagctatggaacctggagcacgccccg
tatttggatcgtgtaatccacctgcccaccgattctcatgtggaatctatagcctgggcg
ggaaaccgcttattttccgtggatttaagtggtaaactgatcgagtgggatgtgattaag
ctaaaacaacgatatgagcactcgcccactggcaatgctctctggagtatcgatgtgaat
cccgcggaaacggatattgccattggctcagaggaagggcacatcaacatcctgagtatt
gagaatgacgaaatcacctataaatccctatttaacaagcaaaaaggtcgcgttctctgc
atcaagtttgataagactggaactaaactggtgaccggcactgagggatttgttcgcatt
tggaacgtcctcaagggaaccactctgcacacgatgaccctatccgaaaagaacgtaata
gtttggtccctgcaggtgctatccgataatacgattattgccggtgattcagcgggattt
gttaccgtttgggatgcggataacgcgacacagatagattccacacgagttctggataaa
aacgtatttgccctggctgtgaataataaggaggatcgattagtttgcagtggaatgcag
ccgccgctcatccggattttcagcaaaaccaagataaagcgggaagagtccaccagcgag
cgttggattaaattcctacagcgcgatgcccacaaacactatgtgaaatccctgttggtt
atcgacgatcaaatttattcgggaggcagggatggcatattgaccattacgtccagtgaa
cgaatgcaggcacatttgtcgcagcatgctccctttctgaaaggttccgtagcttccatg
gcaatcagtaaaaagcttttgcttttgcgatatcccaacagcgtgcacctgtggcgcttg
ggttctgtggccccgcaaggcgaggacaagaagaaaccctgggcactgcccgtcggccac
acggaggaacaacttctggagctgccaccccagaaacttctccaactaaatgtcaaagag
cacaactttatacagtctgctgccatttcatcagatgcaaactggatttgctactctacc
ttaaaggaactccgaatcagtcgtttgaaaagtgatcccctgcaggtggagcgtctggta
gacgatcttcccgaggaacttcaaccagccagtcatataattttcacaaagcagggagat
ctagtgctgctcaacccgcagaacaatcatctaagttggtttactttagaggaagatctg
gttacattcaaatataccatcgatttgagtgagaagtgtaagaatacgattagccacgtg
gttatctcttcgcatggcgaatacattgtggctgcgagctcagaccacataatatcagtt
tggaaactacatggaaaacaatacaagcacctgctgaacctaccaagacaccgagcaggt
accaccgccctatccatgcacgaggattacccacgcgtggtggtcgcctacgccaatggc
cagctggtggagtacgatttggtcaatcggatattcacctgtgaaactaatgagtacctg
atacccgagaccaggcgccattgcatcaatggaatcagcctggatccacaaaatcgtaat
atatttattgttcacaccgagggcaatttgtatgtgttggagagggatcagcatctggat
cccaaagagcttgtgagcaacagcaagtctaaaaagttatcaaatggaaaccgctcttca
gttgatggcggctcaaaaggcctgagcctcaagacgactctgtcacgacaggtaagattg
cacctggtgcacgtgtctcgcctgagccctaacgaacttgtcaacgtcagcatttcgaca
aacaatctgttggctccgctgccgccgccgtaccagcggaagaagttcggtgcctcgtaa

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