Drosophila melanogaster (fruit fly): Dmel_CG5018
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Entry
Dmel_CG5018 CDS
T00030
Symbol
l(3)72Dn
Name
(RefSeq) lethal (3) 72Dn, isoform B
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dmel_CG5018 (l(3)72Dn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dme03009
]
Dmel_CG5018 (l(3)72Dn)
Ribosome biogenesis [BR:
dme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Dmel_CG5018 (l(3)72Dn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_SCAP
RMC1_N
Nucleoporin_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
39774
NCBI-ProteinID:
NP_001261930
FlyBase:
FBgn0263605
UniProt:
M9PFG1
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Position
3L
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AA seq
699 aa
AA seq
DB search
MTNNAKKEPQQRGKHQVHNVRFYTIKPREIVSLAYSKSSKCLALSRATPVIELWNLEHAP
YLDRVIHLPTDSHVESIAWAGNRLFSVDLSGKLIEWDVIKLKQRYEHSPTGNALWSIDVN
PAETDIAIGSEEGHINILSIENDEITYKSLFNKQKGRVLCIKFDKTGTKLVTGTEGFVRI
WNVLKGTTLHTMTLSEKNVIVWSLQVLSDNTIIAGDSAGFVTVWDADNATQIDSTRVLDK
NVFALAVNNKEDRLVCSGMQPPLIRIFSKTKIKREESTSERWIKFLQRDAHKHYVKSLLV
IDDQIYSGGRDGILTITSSERMQAHLSQHAPFLKGSVASMAISKKLLLLRYPNSVHLWRL
GSVAPQGEDKKKPWALPVGHTEEQLLELPPQKLLQLNVKEHNFIQSAAISSDANWICYST
LKELRISRLKSDPLQVERLVDDLPEELQPASHIIFTKQGDLVLLNPQNNHLSWFTLEEDL
VTFKYTIDLSEKCKNTISHVVISSHGEYIVAASSDHIISVWKLHGKQYKHLLNLPRHRAG
TTALSMHEDYPRVVVAYANGQLVEYDLVNRIFTCETNEYLIPETRRHCINGISLDPQNRN
IFIVHTEGNLYVLERDQHLDPKELVSNSKSKKLSNGNRSSVDGGSKGLSLKTTLSRQVRL
HLVHVSRLSPNELVNVSISTNNLLAPLPPPYQRKKFGAS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataatgcgaagaaggaaccccagcaaaggggcaagcatcaggtgcataatgtg
cgcttctacactataaagccgcgtgaaattgtcagcttggcgtatagtaaatcgagcaag
tgcctcgctctgagtcgtgcaacacccgtcattgagctatggaacctggagcacgccccg
tatttggatcgtgtaatccacctgcccaccgattctcatgtggaatctatagcctgggcg
ggaaaccgcttattttccgtggatttaagtggtaaactgatcgagtgggatgtgattaag
ctaaaacaacgatatgagcactcgcccactggcaatgctctctggagtatcgatgtgaat
cccgcggaaacggatattgccattggctcagaggaagggcacatcaacatcctgagtatt
gagaatgacgaaatcacctataaatccctatttaacaagcaaaaaggtcgcgttctctgc
atcaagtttgataagactggaactaaactggtgaccggcactgagggatttgttcgcatt
tggaacgtcctcaagggaaccactctgcacacgatgaccctatccgaaaagaacgtaata
gtttggtccctgcaggtgctatccgataatacgattattgccggtgattcagcgggattt
gttaccgtttgggatgcggataacgcgacacagatagattccacacgagttctggataaa
aacgtatttgccctggctgtgaataataaggaggatcgattagtttgcagtggaatgcag
ccgccgctcatccggattttcagcaaaaccaagataaagcgggaagagtccaccagcgag
cgttggattaaattcctacagcgcgatgcccacaaacactatgtgaaatccctgttggtt
atcgacgatcaaatttattcgggaggcagggatggcatattgaccattacgtccagtgaa
cgaatgcaggcacatttgtcgcagcatgctccctttctgaaaggttccgtagcttccatg
gcaatcagtaaaaagcttttgcttttgcgatatcccaacagcgtgcacctgtggcgcttg
ggttctgtggccccgcaaggcgaggacaagaagaaaccctgggcactgcccgtcggccac
acggaggaacaacttctggagctgccaccccagaaacttctccaactaaatgtcaaagag
cacaactttatacagtctgctgccatttcatcagatgcaaactggatttgctactctacc
ttaaaggaactccgaatcagtcgtttgaaaagtgatcccctgcaggtggagcgtctggta
gacgatcttcccgaggaacttcaaccagccagtcatataattttcacaaagcagggagat
ctagtgctgctcaacccgcagaacaatcatctaagttggtttactttagaggaagatctg
gttacattcaaatataccatcgatttgagtgagaagtgtaagaatacgattagccacgtg
gttatctcttcgcatggcgaatacattgtggctgcgagctcagaccacataatatcagtt
tggaaactacatggaaaacaatacaagcacctgctgaacctaccaagacaccgagcaggt
accaccgccctatccatgcacgaggattacccacgcgtggtggtcgcctacgccaatggc
cagctggtggagtacgatttggtcaatcggatattcacctgtgaaactaatgagtacctg
atacccgagaccaggcgccattgcatcaatggaatcagcctggatccacaaaatcgtaat
atatttattgttcacaccgagggcaatttgtatgtgttggagagggatcagcatctggat
cccaaagagcttgtgagcaacagcaagtctaaaaagttatcaaatggaaaccgctcttca
gttgatggcggctcaaaaggcctgagcctcaagacgactctgtcacgacaggtaagattg
cacctggtgcacgtgtctcgcctgagccctaacgaacttgtcaacgtcagcatttcgaca
aacaatctgttggctccgctgccgccgccgtaccagcggaagaagttcggtgcctcgtaa
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