KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5099
Entry
Dmel_CG5099       CDS       T00030                                 
Symbol
msi
Name
(RefSeq) musashi, isoform C
  KO
K14411  RNA-binding protein Musashi
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dmel_CG5099 (msi)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG5099 (msi)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Dmel_CG5099 (msi)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 CytochromB561_N NID
Other DBs
NCBI-GeneID: 43087
NCBI-ProteinID: NP_001247303
FlyBase: FBgn0011666
UniProt: Q8IMS8
LinkDB
Position
3R
AA seq 634 aa
MLFENPAVAAKLPFPYNVPPPLQAAAAAAAAVPNLRFQTPIKAFACLTAATRSVSEMNAT
SLYAGNPMENAAAAAAAAAAGLIDPHHNRDLHQALVASIANNSVAAIGGGLTTAAVLKSA
AQQSQQAVQQNQNAVVVTPGLEQPKQEPAQQAALALLKENVNASAGAGQNNGQAAMGGSN
KSGSSGRSTPSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVT
QRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQ
DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKK
VECKKAQPKEAVTPAAQLLQKRIMLGTLGVQLPTAPGQLIGARGAGVATMNPLAMLQNPT
QLLQSPAAAAAAQQAALISQNPFQVQNAAAAASIANQAGFGKLLTTYPQTALHSVRYAPY
SIPASAATANAALMQAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHHN
AVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAGLMAGNPLNAAAAAAAAAA
NPAAAYSNYALANVDMSSFQGVDWSTMYGMGMYV
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgctgttcgagaatccggcggttgcggccaagttgccctttccgtacaacgtgcccccg
cccctgcaggcggcggcggcagcagcggcggctgtcccaaatctaaggtttcagacaccc
attaaagcgtttgcctgcctgacagcagccacaaggtcagtatcggagatgaacgccact
tctctatatgccggcaatcccatggagaacgcggccgcagcagccgccgccgcagcagcg
ggcttgattgatccgcaccacaatcgcgatctccaccaggcgctggtggcctcgatagcc
aataatagtgtggccgccatcggcggtggcctgaccacagcggcagtcttgaagagtgcc
gctcagcagtcccagcaggcggtgcaacagaaccagaacgcggtagtggtgacaccggga
ctggaacagcccaaacaggaaccagcccaacaggcggcactggcgctgctcaaggagaat
gtaaacgcctccgccggagcgggacagaacaacggtcaggcggccatgggtggcagcaac
aagagcggctcctctggcagatccacgcccagcctgagcggaggcagtggctccgatccg
gcacccggcaaactctttgtcggcggtctcagctggcagacgtcgtctgacaagctcaag
gaatacttcaacatgttcggcaccgtcaccgatgtgctcatcatgaaggatcccgtcacc
cagcgcagtcgcggctttggtttcatcacattccaagaaccctgcaccgtggagaaggtt
ctcaaggtgcccattcacacactcgatggcaagaagatcgatcccaagcatgccacccca
aagaatcgacctcgtcaggccaacaagaccaagaagatcttcgtgggcggcgtctcacag
gatacttcggccgaggaggttaaggcttacttcagccagttcggacccgtcgaggagacg
gttatgttgatggaccagcagacaaagcgccaccgtggcttcggatttgtcacctttgag
aatgaggatgtggtcgatcgcgtatgtgagattcacttccacaccatcaagaacaagaag
gtcgagtgcaagaaggcacagcccaaggaagcagtcacaccggctgctcagcttctccag
aagcgcattatgttgggcaccctcggcgtccagctgcccacagctcctggccagctgatt
ggagcccgtggtgccggcgtggccaccatgaacccactggccatgcttcaaaatcccaca
cagctactgcaatccccggcagcagccgctgccgcccagcaggccgccctcatatcacag
aacccatttcaagtacaaaacgccgctgcggcagcctcgattgccaatcaggctggcttc
ggcaagctgttgaccacatatccgcagactgcgctgcatagcgtcagatatgcaccctac
tcgatccccgccagcgccgccactgccaacgccgccttgatgcaggctcatcaggcgcaa
agcgtggccgccgctgcccatcatcaccagcagcagcaacagcagcagcatcatcaccag
cagcagacccacaatgcccatgtggccgccgcccagcagcagcagcagagccaccacaac
gccgtctcgaatcccgcttcgcaggcgcactcggcagcagcggctgccgccctggcggcc
aatgccgcgaatggggcaggtgccgctggagcccacagcctggccgctgccgctcagcaa
gctggcttaatggccggcaatcccctgaatgccgctgctgccgccgccgccgctgctgcc
aatccggcggctgcctactccaactatgcgctggccaacgtggacatgtccagcttccag
ggcgtcgattggagcaccatgtacggcatgggcatgtacgtctaa

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