Drosophila melanogaster (fruit fly): Dmel_CG5166
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Entry
Dmel_CG5166 CDS
T00030
Symbol
Atx2
Name
(RefSeq) Ataxin-2, isoform B
KO
K23625
ataxin 2/2L
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
Dmel_CG5166 (Atx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG5166 (Atx2)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Dmel_CG5166 (Atx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
Motif
Other DBs
NCBI-GeneID:
41883
NCBI-ProteinID:
NP_732033
FlyBase:
FBgn0041188
UniProt:
Q8SWR8
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All DBs
Position
3R
Genome browser
AA seq
1084 aa
AA seq
DB search
MNNNSKRKTRPTGGGASGGISRYNSNDNSLRPTNNKAGAGGGNGGAAVRPSAQGVYNNTF
FMHSATALVGSVVEVRLRSGNIYEGVFRTFSGNFDIALELPACIKSKNLPEEGKVPKHII
FPADTVVTIVAKDFDSQYATAGAFQTDGAISDKCNGARPDEKELEPWDSGANGDIDIELD
SAANGWDPNEMFRKNENTFGVTSTFDDSLASYTVPLDKGDSLEFKEAEAKAEKLAAEIEN
NPTCRDRLDLENGDEEALFAAVERPSTEQDQRGDRGDRERNDRDREREERDRDRDRDRGN
KPRGAGDFQLRETMSSDRYITKQTRSITGPQLSHVGMSSQGSGRDRDTRGDGSMMMQSGG
GSGQGGSTQSTAALMLAGGLKGVGPAPSANASADSSSKYSGGSMVKRKTVPQGGKVMRNN
VPTGGSNVSVSQGGNGNSVGQNKGGYQPSMGMPSQYSYQGNSQIMHGSSQYRNQSHMGGA
NKLNGDSNANTNKPLPQRQMRQYQGSQSNSSLNYGGEPQSLGKPVHGSHGGHPGQNSNSP
PLQTAGPQQQQQQQQQQQQQQQQQQPPQQQQHQNIQPQGQNTQPARQVRTRDNQMQELRQ
FGQDFQLAPSNTSPPQQQQQQQQQQQQHQVQQQQQRALQQSASPPQQQQQQQQQQQHVVL
HQVPQTHLHQAALSQPHYVPQQQPQQAPLPQQQHVPHHMQQKAQQQQLVETQHQHVQKQH
QSQPQVQQPPPQLLQDPSQQPLPIYHTMPPPQTSPVVVTSPVLLEQPPPQPMPVVQQQQT
QQLATPKPEVSPAPPSSNTTTPTGIASTPTAGVIASAGSEKTTPAAPTPTSNSATVPTGT
AATAGGATGTTPVVKKHVLNPSAKPFTPRGPSTPNPSRPHTPQTPVPMTNIYTTTGGHVP
PAANQPIYVMQPQHPFPPQTHPQAGQPPRLRRSNYPPMAASQMHVSASAATGQPLITAGP
IPQFIQYGHAPHQQQFQSHTYAPMQMRVYPDQPQQLQFMTQTPQSTTPSPGQPHQQFHPP
PQPSPAGGGPQPAFTPPTQAATYQLMCVHPQSLLANHYFPPPTPQHPQQNQQQYQIVMQQ
HQPQ
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatagcaagcggaaaacccgacccactggcggcggtgccagcggcggcatc
tcaagatacaactccaacgataacagcctaaggcccactaacaacaaggctggtgcagga
ggcgggaacggaggcgcagcagtgcgtccgtcggcgcagggcgtctacaacaacacgttt
ttcatgcactcggccacggcgctggtgggcagcgttgtggaggtgcgcctgcggtcgggc
aatatctacgagggcgtattccgcacattctcgggcaactttgacatcgcactggagcta
ccggcgtgcattaagtccaagaatctgccggaggagggcaaggtgccaaaacacattata
ttcccggccgacactgtggtgaccatcgtggccaaggactttgactcgcaatacgccacc
gcaggcgcttttcagacggatggcgccatttctgacaagtgcaacggtgcgcgtccggac
gagaaggaattggaaccatgggattctggcgctaatggcgacattgacatagaattggat
agtgccgccaacggctgggatcccaacgagatgttccgcaaaaatgagaacacgttcggt
gtgacctccacatttgatgattctctagcttcgtacacggtaccgctagataagggtgat
tccctagaattcaaagaggccgaagccaaggccgaaaagctggctgccgagatcgaaaat
aatccgacgtgccgggaccgtctggacttggaaaatggtgatgaggaggcgctcttcgcg
gccgtggagcgtccatcgaccgagcaggatcaacgcggagatcgtggcgaccgcgaacgc
aacgatcgagatagggagcgcgaggagcgggacagggaccgtgatcgtgatcgcggtaac
aagccccgtggcgctggtgacttccagttgagggagaccatgagtagcgaccgctacata
acaaaacagacgcgcagtatcaccggaccgcagctatcgcatgttggcatgtcctcgcag
ggcagcggacgcgatcgtgacactcgtggcgatggcagcatgatgatgcaaagtggcggc
gggtcgggccaaggcggctccacgcagtcgacggcagcacttatgctagccggcggcctg
aagggcgtgggtccggccccctcagcaaacgcgtccgcggactcgtccagcaagtatagc
ggcggttcgatggtaaagcgcaagacggtgccccagggcggtaaggtgatgcgcaacaat
gtgcctacaggtggcagcaacgtctccgtgtcgcagggcggcaacggcaattctgtgggc
cagaacaagggcggctaccagccgtcgatgggcatgccgagtcaatactcctaccagggt
aactcgcaaattatgcatgggtcttctcagtaccgcaaccaatctcacatgggcggcgca
aataagctaaatggcgattcgaacgccaataccaacaagccgctgccacagcgccagatg
cgccagtaccagggctctcagagcaactcgtcactgaactatggcggtgaaccccagtcg
ctgggtaagcccgtgcacggctcccatggaggccatcccgggcaaaatagcaactcgccg
ccgctgcagaccgccggcccacagcagcaacagcagcaacagcagcaacagcagcagcag
cagcaacaacaacagccgccgcagcaacagcagcatcagaacatacagccacaagggcaa
aacacgcaaccagcgcgtcaggtgcgcacgcgcgataaccaaatgcaggaactgcgacag
tttggccaggacttccaactggccccgagcaacacttcaccgccccagcagcaacagcag
cagcagcagcagcagcagcagcatcaagtgcagcagcagcaacagcgagcgttgcagcaa
tctgcctcgccaccgcaacagcagcagcagcagcagcaacaacagcagcacgtggtcctg
caccaagtgccgcaaacgcacctgcatcaagcggccctatcacagccacactatgtgcct
cagcagcagcctcagcaggcgccgcttccacagcagcaacatgtgccgcatcacatgcaa
caaaaggcccagcagcagcaattggtggagacccagcatcagcatgtgcagaagcagcac
cagtcgcagccacaagtgcagcagccgccgccacagctgctccaggatccatcacaacag
ccgttgccaatttaccatacaatgccgccgccacagacttcacccgtagttgttacttcg
ccggttctgctggagcagcctccgccacaacccatgccggtggtgcagcaacagcagacg
cagcagcttgccacgcccaaacctgaagtttcgccggcaccaccaagcagcaacaccacc
acacctactggcatagccagtacgcctacagcaggggtgattgccagcgctggatctgag
aaaaccacgccggcagcgcccactccgacgagcaattccgcaacggtgcctacaggaacg
gccgccactgctggaggtgccacgggaaccactccggtggttaagaagcatgtgctcaac
ccatcagccaagccatttacaccccgcgggcccagcaccccgaatccatcacgaccgcac
accccacagacgcctgtgcccatgacgaacatttacacaaccacgggaggacatgtaccg
ccggcggccaaccagccgatctacgtcatgcagccacagcatccattcccgcctcagaca
cacccacaggccggacagccaccgcgccttcgccgtagtaattaccctccaatggccgca
tcgcagatgcacgtatcggcatccgcggccacgggtcagccgttgataacagccggcccg
ataccgcaattcatccagtacggccatgcaccacaccagcaacaattccaatcacatacg
tacgcgccaatgcagatgcgcgtgtacccggaccagccgcagcagttgcagtttatgaca
cagacgccacagtcgaccacaccgtcgccgggccagccgcaccagcagttccatccgccg
ccacagccatcccccgccggcgggggaccacaaccggcgttcacgccgcccacacaggca
gccacttaccagctgatgtgcgtgcacccccaatcgctcttagccaatcactatttcccg
ccgccgacgccgcagcatccgcagcagaatcaacaacagtatcagatcgtgatgcagcag
catcagccacagtga
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