KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5166
Entry
Dmel_CG5166       CDS       T00030                                 
Symbol
Atx2
Name
(RefSeq) Ataxin-2, isoform B
  KO
K23625  ataxin 2/2L
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme04711  Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:dme00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04711 Circadian rhythm - fly
    Dmel_CG5166 (Atx2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG5166 (Atx2)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Dmel_CG5166 (Atx2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 41883
NCBI-ProteinID: NP_732033
FlyBase: FBgn0041188
UniProt: Q8SWR8
LinkDB
Position
3R
AA seq 1084 aa
MNNNSKRKTRPTGGGASGGISRYNSNDNSLRPTNNKAGAGGGNGGAAVRPSAQGVYNNTF
FMHSATALVGSVVEVRLRSGNIYEGVFRTFSGNFDIALELPACIKSKNLPEEGKVPKHII
FPADTVVTIVAKDFDSQYATAGAFQTDGAISDKCNGARPDEKELEPWDSGANGDIDIELD
SAANGWDPNEMFRKNENTFGVTSTFDDSLASYTVPLDKGDSLEFKEAEAKAEKLAAEIEN
NPTCRDRLDLENGDEEALFAAVERPSTEQDQRGDRGDRERNDRDREREERDRDRDRDRGN
KPRGAGDFQLRETMSSDRYITKQTRSITGPQLSHVGMSSQGSGRDRDTRGDGSMMMQSGG
GSGQGGSTQSTAALMLAGGLKGVGPAPSANASADSSSKYSGGSMVKRKTVPQGGKVMRNN
VPTGGSNVSVSQGGNGNSVGQNKGGYQPSMGMPSQYSYQGNSQIMHGSSQYRNQSHMGGA
NKLNGDSNANTNKPLPQRQMRQYQGSQSNSSLNYGGEPQSLGKPVHGSHGGHPGQNSNSP
PLQTAGPQQQQQQQQQQQQQQQQQQPPQQQQHQNIQPQGQNTQPARQVRTRDNQMQELRQ
FGQDFQLAPSNTSPPQQQQQQQQQQQQHQVQQQQQRALQQSASPPQQQQQQQQQQQHVVL
HQVPQTHLHQAALSQPHYVPQQQPQQAPLPQQQHVPHHMQQKAQQQQLVETQHQHVQKQH
QSQPQVQQPPPQLLQDPSQQPLPIYHTMPPPQTSPVVVTSPVLLEQPPPQPMPVVQQQQT
QQLATPKPEVSPAPPSSNTTTPTGIASTPTAGVIASAGSEKTTPAAPTPTSNSATVPTGT
AATAGGATGTTPVVKKHVLNPSAKPFTPRGPSTPNPSRPHTPQTPVPMTNIYTTTGGHVP
PAANQPIYVMQPQHPFPPQTHPQAGQPPRLRRSNYPPMAASQMHVSASAATGQPLITAGP
IPQFIQYGHAPHQQQFQSHTYAPMQMRVYPDQPQQLQFMTQTPQSTTPSPGQPHQQFHPP
PQPSPAGGGPQPAFTPPTQAATYQLMCVHPQSLLANHYFPPPTPQHPQQNQQQYQIVMQQ
HQPQ
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgaacaacaatagcaagcggaaaacccgacccactggcggcggtgccagcggcggcatc
tcaagatacaactccaacgataacagcctaaggcccactaacaacaaggctggtgcagga
ggcgggaacggaggcgcagcagtgcgtccgtcggcgcagggcgtctacaacaacacgttt
ttcatgcactcggccacggcgctggtgggcagcgttgtggaggtgcgcctgcggtcgggc
aatatctacgagggcgtattccgcacattctcgggcaactttgacatcgcactggagcta
ccggcgtgcattaagtccaagaatctgccggaggagggcaaggtgccaaaacacattata
ttcccggccgacactgtggtgaccatcgtggccaaggactttgactcgcaatacgccacc
gcaggcgcttttcagacggatggcgccatttctgacaagtgcaacggtgcgcgtccggac
gagaaggaattggaaccatgggattctggcgctaatggcgacattgacatagaattggat
agtgccgccaacggctgggatcccaacgagatgttccgcaaaaatgagaacacgttcggt
gtgacctccacatttgatgattctctagcttcgtacacggtaccgctagataagggtgat
tccctagaattcaaagaggccgaagccaaggccgaaaagctggctgccgagatcgaaaat
aatccgacgtgccgggaccgtctggacttggaaaatggtgatgaggaggcgctcttcgcg
gccgtggagcgtccatcgaccgagcaggatcaacgcggagatcgtggcgaccgcgaacgc
aacgatcgagatagggagcgcgaggagcgggacagggaccgtgatcgtgatcgcggtaac
aagccccgtggcgctggtgacttccagttgagggagaccatgagtagcgaccgctacata
acaaaacagacgcgcagtatcaccggaccgcagctatcgcatgttggcatgtcctcgcag
ggcagcggacgcgatcgtgacactcgtggcgatggcagcatgatgatgcaaagtggcggc
gggtcgggccaaggcggctccacgcagtcgacggcagcacttatgctagccggcggcctg
aagggcgtgggtccggccccctcagcaaacgcgtccgcggactcgtccagcaagtatagc
ggcggttcgatggtaaagcgcaagacggtgccccagggcggtaaggtgatgcgcaacaat
gtgcctacaggtggcagcaacgtctccgtgtcgcagggcggcaacggcaattctgtgggc
cagaacaagggcggctaccagccgtcgatgggcatgccgagtcaatactcctaccagggt
aactcgcaaattatgcatgggtcttctcagtaccgcaaccaatctcacatgggcggcgca
aataagctaaatggcgattcgaacgccaataccaacaagccgctgccacagcgccagatg
cgccagtaccagggctctcagagcaactcgtcactgaactatggcggtgaaccccagtcg
ctgggtaagcccgtgcacggctcccatggaggccatcccgggcaaaatagcaactcgccg
ccgctgcagaccgccggcccacagcagcaacagcagcaacagcagcaacagcagcagcag
cagcaacaacaacagccgccgcagcaacagcagcatcagaacatacagccacaagggcaa
aacacgcaaccagcgcgtcaggtgcgcacgcgcgataaccaaatgcaggaactgcgacag
tttggccaggacttccaactggccccgagcaacacttcaccgccccagcagcaacagcag
cagcagcagcagcagcagcagcatcaagtgcagcagcagcaacagcgagcgttgcagcaa
tctgcctcgccaccgcaacagcagcagcagcagcagcaacaacagcagcacgtggtcctg
caccaagtgccgcaaacgcacctgcatcaagcggccctatcacagccacactatgtgcct
cagcagcagcctcagcaggcgccgcttccacagcagcaacatgtgccgcatcacatgcaa
caaaaggcccagcagcagcaattggtggagacccagcatcagcatgtgcagaagcagcac
cagtcgcagccacaagtgcagcagccgccgccacagctgctccaggatccatcacaacag
ccgttgccaatttaccatacaatgccgccgccacagacttcacccgtagttgttacttcg
ccggttctgctggagcagcctccgccacaacccatgccggtggtgcagcaacagcagacg
cagcagcttgccacgcccaaacctgaagtttcgccggcaccaccaagcagcaacaccacc
acacctactggcatagccagtacgcctacagcaggggtgattgccagcgctggatctgag
aaaaccacgccggcagcgcccactccgacgagcaattccgcaacggtgcctacaggaacg
gccgccactgctggaggtgccacgggaaccactccggtggttaagaagcatgtgctcaac
ccatcagccaagccatttacaccccgcgggcccagcaccccgaatccatcacgaccgcac
accccacagacgcctgtgcccatgacgaacatttacacaaccacgggaggacatgtaccg
ccggcggccaaccagccgatctacgtcatgcagccacagcatccattcccgcctcagaca
cacccacaggccggacagccaccgcgccttcgccgtagtaattaccctccaatggccgca
tcgcagatgcacgtatcggcatccgcggccacgggtcagccgttgataacagccggcccg
ataccgcaattcatccagtacggccatgcaccacaccagcaacaattccaatcacatacg
tacgcgccaatgcagatgcgcgtgtacccggaccagccgcagcagttgcagtttatgaca
cagacgccacagtcgaccacaccgtcgccgggccagccgcaccagcagttccatccgccg
ccacagccatcccccgccggcgggggaccacaaccggcgttcacgccgcccacacaggca
gccacttaccagctgatgtgcgtgcacccccaatcgctcttagccaatcactatttcccg
ccgccgacgccgcagcatccgcagcagaatcaacaacagtatcagatcgtgatgcagcag
catcagccacagtga

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