KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5313
Entry
Dmel_CG5313       CDS       T00030                                 
Symbol
RfC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03030  DNA replication
dme03410  Base excision repair
dme03420  Nucleotide excision repair
dme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dmel_CG5313 (RfC3)
   03410 Base excision repair
    Dmel_CG5313 (RfC3)
   03420 Nucleotide excision repair
    Dmel_CG5313 (RfC3)
   03430 Mismatch repair
    Dmel_CG5313 (RfC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dme03032]
    Dmel_CG5313 (RfC3)
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG5313 (RfC3)
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG5313 (RfC3)
DNA replication proteins [BR:dme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Dmel_CG5313 (RfC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    Dmel_CG5313 (RfC3)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Dmel_CG5313 (RfC3)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Dmel_CG5313 (RfC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    Dmel_CG5313 (RfC3)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 DUF815 AAA_14 AAA_11 AAA_assoc_2 AAA_16 ResIII DEAD RuvB_N AAA_lid_RFC1 AAA_7 PhoH AAA_5 AAA_30 AAA_19 AAA_24 nSTAND_NTPase5 nSTAND3 Mg_chelatase RCF1-5-like_lid bpMoxR TIP49 DUF8027
Other DBs
NCBI-GeneID: 34423
NCBI-ProteinID: NP_609399
FlyBase: FBgn0032244
UniProt: Q9VKW3
LinkDB
Position
2L:10419190..10420612
AA seq 332 aa
MSETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTST
ILACARQLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKI
IEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQ
ILKALLSGSSLEDSFKTVESAKYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQI
EERLAKGCTEVAQTAALVAAFFICRDMVSMEK
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcggaaaccagtggacccgcagtgcgcatgccttgggtggaaaagtacagaccaagc
ggtctcgatgatttgatatctcacgaggaaataatatcaacaataacccgctttataagc
cgcaagcagctgccccatttgctgttctacggaccacctggcacgggaaaaacgagtaca
atcctggcctgcgctcgccaattgtattcccctcagcagtttaagtccatggtcctggag
ctgaatgcctcggatgaccgaggcattgggattgtgcgcggtcaaatccttaacttcgcg
tccacacgcaccattttctgcgacacctttaagctgatcattttggacgaggccgatgcc
atgaccaacgatgcccagaatgccctgcgccgcataattgagaaatatacggacaacgtg
cgcttctgtgtgatttgcaattatttgagcaaaatcattccggcgctgcagtcgcgttgc
acccgttttcggttcgctccattatcccaggatcagatgatgccgcgactggaaaaaatc
atcgaagccgaagccgttcagataactgaggacggcaagcgggcactgctgaccctggcc
aaaggtgatatgagaaaggtcttgaacgtcctgcagagtaccgtgatggcatttgatacg
gtaaacgaggataacgtctacatgtgcgtgggctatccgttgaggcaggatattgaacag
atattgaaggccttgctatccggcagtagcttggaggactccttcaaaactgtcgaaagt
gccaagtacgcaagaggtctcgctttggaagacatcattacagaattgcatttgtttgtt
atgagacttgagctgcctatgtcggtcatgaacaagcttattgtaaagctagctcagatc
gaggagagattggccaaaggatgtacagaagtggctcaaactgcagctctggtagccgcc
ttctttatttgccgagatatggtttcaatggagaagtga

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