Drosophila melanogaster (fruit fly): Dmel_CG5313
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Entry
Dmel_CG5313 CDS
T00030
Symbol
RfC3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03030
DNA replication
dme03410
Base excision repair
dme03420
Nucleotide excision repair
dme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dmel_CG5313 (RfC3)
03410 Base excision repair
Dmel_CG5313 (RfC3)
03420 Nucleotide excision repair
Dmel_CG5313 (RfC3)
03430 Mismatch repair
Dmel_CG5313 (RfC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dme03032
]
Dmel_CG5313 (RfC3)
03036 Chromosome and associated proteins [BR:
dme03036
]
Dmel_CG5313 (RfC3)
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG5313 (RfC3)
DNA replication proteins [BR:
dme03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Dmel_CG5313 (RfC3)
DNA Replication Termination Factors
ELG1-RFC complex
Dmel_CG5313 (RfC3)
Chromosome and associated proteins [BR:
dme03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Dmel_CG5313 (RfC3)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Dmel_CG5313 (RfC3)
Check point factors
HRAD17(Rad24)-RFC complex
Dmel_CG5313 (RfC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
DUF815
AAA_14
AAA_11
AAA_assoc_2
AAA_16
ResIII
DEAD
RuvB_N
AAA_lid_RFC1
AAA_7
PhoH
AAA_5
AAA_30
AAA_19
AAA_24
nSTAND_NTPase5
nSTAND3
Mg_chelatase
RCF1-5-like_lid
bpMoxR
TIP49
DUF8027
Motif
Other DBs
NCBI-GeneID:
34423
NCBI-ProteinID:
NP_609399
FlyBase:
FBgn0032244
UniProt:
Q9VKW3
LinkDB
All DBs
Position
2L:10419190..10420612
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AA seq
332 aa
AA seq
DB search
MSETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTST
ILACARQLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKI
IEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQ
ILKALLSGSSLEDSFKTVESAKYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQI
EERLAKGCTEVAQTAALVAAFFICRDMVSMEK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaccagtggacccgcagtgcgcatgccttgggtggaaaagtacagaccaagc
ggtctcgatgatttgatatctcacgaggaaataatatcaacaataacccgctttataagc
cgcaagcagctgccccatttgctgttctacggaccacctggcacgggaaaaacgagtaca
atcctggcctgcgctcgccaattgtattcccctcagcagtttaagtccatggtcctggag
ctgaatgcctcggatgaccgaggcattgggattgtgcgcggtcaaatccttaacttcgcg
tccacacgcaccattttctgcgacacctttaagctgatcattttggacgaggccgatgcc
atgaccaacgatgcccagaatgccctgcgccgcataattgagaaatatacggacaacgtg
cgcttctgtgtgatttgcaattatttgagcaaaatcattccggcgctgcagtcgcgttgc
acccgttttcggttcgctccattatcccaggatcagatgatgccgcgactggaaaaaatc
atcgaagccgaagccgttcagataactgaggacggcaagcgggcactgctgaccctggcc
aaaggtgatatgagaaaggtcttgaacgtcctgcagagtaccgtgatggcatttgatacg
gtaaacgaggataacgtctacatgtgcgtgggctatccgttgaggcaggatattgaacag
atattgaaggccttgctatccggcagtagcttggaggactccttcaaaactgtcgaaagt
gccaagtacgcaagaggtctcgctttggaagacatcattacagaattgcatttgtttgtt
atgagacttgagctgcctatgtcggtcatgaacaagcttattgtaaagctagctcagatc
gaggagagattggccaaaggatgtacagaagtggctcaaactgcagctctggtagccgcc
ttctttatttgccgagatatggtttcaatggagaagtga
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