KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5316
Entry
Dmel_CG5316       CDS       T00030                                 
Symbol
Aptx
Name
(RefSeq) aprataxin, isoform B
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dmel_CG5316 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG5316 (Aptx)
Enzymes [BR:dme01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     Dmel_CG5316 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     Dmel_CG5316 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     Dmel_CG5316 (Aptx)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     Dmel_CG5316 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     Dmel_CG5316 (Aptx)
SSDB
Motif
Pfam: DcpS_C zf-C2HE HIT Zf-C2H2_ZNF451_C zf-C2H2_ZFHX3
Other DBs
NCBI-GeneID: 42322
NCBI-ProteinID: NP_650805
FlyBase: FBgn0038704
UniProt: Q8MSG8
LinkDB
Position
3R
AA seq 662 aa
MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLL
EELHLLARNVVEVKGVRWQDFNVGFHAEPSMQRLHLHVISKDFVSTSLKTKKHWNSFNTE
LFVPYTKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGHLVGHLQDP
KSVCQRVRLGNQFFPTAGYRTSELAYCFDFVDFYEYKKQMEVDKLAYIRDELQRKLNDKR
NFLIESDRAVVMKADYPKSQYHFRVVAKEEFRDITQLTEAQLPLLDHMMDLANQIIEKQK
HLESRNFLIGFKVNTFWNRLNLHVISNDFYSMAMKRISHWNSFNTELFMPFQIAYMMLSV
QGSIESISEETYNNLQEKTPLRCNQCEFVTNMLLDLKAHLYQHWQRKEDERDQKKKVDKI
IQMISETKLDEAEAKPKLLNEEEPIQAQPVAAIAQYPNEHLGKPLTPQQQPGKQQAQNVY
DKNINGPSVNMMNQNNPNNPFRNTPHLNRQSQKPPHPRSGPRGPMAPWTGPRFPCHQQQN
RFRPPGFNACRQPYPPYHSGHQQFPNASSVGGGQTGLPGQGQGPRPKWNSNKIFNQQNRQ
NTVQAQPQAQNQQTNQQQIQNSNKNQTPKKKPWKNRLQPVGKVQNQGGANRDPAPPSNSK
PS
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgtcctggtcaagtgcactaatcaaagatatctcgaaaccagaaaatttgatcatttcg
tcagaaatcgcagtggtcatagcagacaagtttcccaaggcgcagcatcactacttggtg
ctaccattggccgacattcccagcatctttcacttgaaccggagccatctgtcgcttttg
gaggagctgcatctgctggccaggaacgttgtggaagtgaaaggagtccggtggcaggac
ttcaacgtgggatttcacgcggagccgagcatgcaaaggctccacctgcacgtcatctcc
aaggacttcgtatcaacaagcctgaagaccaagaagcattggaactcattcaacaccgag
ctgtttgtgccctacacaaagctttacgcccagctggagaaggagaatagcatttcgcga
ctcccgaaatcactaaaagacgagctgctggccaagccactcatttgtaatcagtgcgag
tttgttgcaagaaatttgccatcacttaaggggcatctggtggggcaccttcaagatccg
aaatcagtttgccagcgagtccgactagggaaccagttctttcccacagctggttacaga
acgtcagaacttgcatattgtttcgatttcgtggatttctacgaatacaaaaagcaaatg
gaggtggataaattggcatatatccgagatgagctgcagcgcaagctaaatgataagagg
aacttccttatcgagagtgaccgggcggtggtcatgaaagcggactatcctaaatcgcaa
taccactttagggtggtggccaaggaagagttcagggatataactcagctaaccgaagcg
cagctgcccctgctggatcacatgatggatctggcgaatcaaatcatcgagaagcagaaa
cacctggagtcgcgtaattttctcatcggtttcaaagtcaatactttctggaatcgtcta
aatctacatgttatttctaacgacttctattccatggccatgaaacgtataagtcactgg
aatagtttcaatacggaactatttatgccctttcaaattgcgtatatgatgctcagtgtt
cagggatccattgaatccatttcggaggagacgtacaataatttgcaagagaagacgcca
ttgcgatgcaaccagtgcgaatttgttactaatatgttgctggatctaaaagctcacctg
tatcagcactggcagcgcaaggaggacgagcgcgatcagaagaaaaaagtcgataaaata
atccaaatgatatctgagaccaaactggatgaggcagaggcaaagccgaagctgttgaat
gaagaggaacctattcaagctcagcccgttgccgctatcgcccagtatcccaatgaacat
ctaggcaagcccttaacgccgcaacagcagccgggcaagcagcaggcccagaatgtttac
gacaaaaacattaacgggccttctgtgaatatgatgaatcagaacaatcccaacaatccg
ttccggaacactccgcaccttaatagacaatcacagaaaccgccgcatccccgctctggg
ccccgtggaccaatggctccttggactggtccgcgctttccgtgtcatcaacagcagaac
agattcaggcctccaggatttaacgcatgtcggcaaccttatccaccctatcattcaggc
catcagcaatttccgaatgcttcatcagtcggcggcggtcaaactgggctgccaggtcag
ggacagggacctagaccgaaatggaattcaaataagatattcaatcaacagaaccgccaa
aatacagtccaagcccagccacaagcccagaaccaacaaaccaaccagcagcagattcaa
aattcgaataaaaaccaaactccaaaaaaaaagccatggaaaaatcgcctgcaacctgta
ggcaaagttcagaatcaaggcggagcgaatcgcgatcccgcacctccaagtaactcgaaa
ccatcttag

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