Drosophila melanogaster (fruit fly): Dmel_CG5316
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Entry
Dmel_CG5316 CDS
T00030
Symbol
Aptx
Name
(RefSeq) aprataxin, isoform B
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dmel_CG5316 (Aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG5316 (Aptx)
Enzymes [BR:
dme01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
Dmel_CG5316 (Aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
Dmel_CG5316 (Aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
Dmel_CG5316 (Aptx)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
Dmel_CG5316 (Aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
Dmel_CG5316 (Aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Zf-C2H2_ZNF451_C
zf-C2H2_ZFHX3
Motif
Other DBs
NCBI-GeneID:
42322
NCBI-ProteinID:
NP_650805
FlyBase:
FBgn0038704
UniProt:
Q8MSG8
LinkDB
All DBs
Position
3R
Genome browser
AA seq
662 aa
AA seq
DB search
MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLL
EELHLLARNVVEVKGVRWQDFNVGFHAEPSMQRLHLHVISKDFVSTSLKTKKHWNSFNTE
LFVPYTKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGHLVGHLQDP
KSVCQRVRLGNQFFPTAGYRTSELAYCFDFVDFYEYKKQMEVDKLAYIRDELQRKLNDKR
NFLIESDRAVVMKADYPKSQYHFRVVAKEEFRDITQLTEAQLPLLDHMMDLANQIIEKQK
HLESRNFLIGFKVNTFWNRLNLHVISNDFYSMAMKRISHWNSFNTELFMPFQIAYMMLSV
QGSIESISEETYNNLQEKTPLRCNQCEFVTNMLLDLKAHLYQHWQRKEDERDQKKKVDKI
IQMISETKLDEAEAKPKLLNEEEPIQAQPVAAIAQYPNEHLGKPLTPQQQPGKQQAQNVY
DKNINGPSVNMMNQNNPNNPFRNTPHLNRQSQKPPHPRSGPRGPMAPWTGPRFPCHQQQN
RFRPPGFNACRQPYPPYHSGHQQFPNASSVGGGQTGLPGQGQGPRPKWNSNKIFNQQNRQ
NTVQAQPQAQNQQTNQQQIQNSNKNQTPKKKPWKNRLQPVGKVQNQGGANRDPAPPSNSK
PS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtcaagtgcactaatcaaagatatctcgaaaccagaaaatttgatcatttcg
tcagaaatcgcagtggtcatagcagacaagtttcccaaggcgcagcatcactacttggtg
ctaccattggccgacattcccagcatctttcacttgaaccggagccatctgtcgcttttg
gaggagctgcatctgctggccaggaacgttgtggaagtgaaaggagtccggtggcaggac
ttcaacgtgggatttcacgcggagccgagcatgcaaaggctccacctgcacgtcatctcc
aaggacttcgtatcaacaagcctgaagaccaagaagcattggaactcattcaacaccgag
ctgtttgtgccctacacaaagctttacgcccagctggagaaggagaatagcatttcgcga
ctcccgaaatcactaaaagacgagctgctggccaagccactcatttgtaatcagtgcgag
tttgttgcaagaaatttgccatcacttaaggggcatctggtggggcaccttcaagatccg
aaatcagtttgccagcgagtccgactagggaaccagttctttcccacagctggttacaga
acgtcagaacttgcatattgtttcgatttcgtggatttctacgaatacaaaaagcaaatg
gaggtggataaattggcatatatccgagatgagctgcagcgcaagctaaatgataagagg
aacttccttatcgagagtgaccgggcggtggtcatgaaagcggactatcctaaatcgcaa
taccactttagggtggtggccaaggaagagttcagggatataactcagctaaccgaagcg
cagctgcccctgctggatcacatgatggatctggcgaatcaaatcatcgagaagcagaaa
cacctggagtcgcgtaattttctcatcggtttcaaagtcaatactttctggaatcgtcta
aatctacatgttatttctaacgacttctattccatggccatgaaacgtataagtcactgg
aatagtttcaatacggaactatttatgccctttcaaattgcgtatatgatgctcagtgtt
cagggatccattgaatccatttcggaggagacgtacaataatttgcaagagaagacgcca
ttgcgatgcaaccagtgcgaatttgttactaatatgttgctggatctaaaagctcacctg
tatcagcactggcagcgcaaggaggacgagcgcgatcagaagaaaaaagtcgataaaata
atccaaatgatatctgagaccaaactggatgaggcagaggcaaagccgaagctgttgaat
gaagaggaacctattcaagctcagcccgttgccgctatcgcccagtatcccaatgaacat
ctaggcaagcccttaacgccgcaacagcagccgggcaagcagcaggcccagaatgtttac
gacaaaaacattaacgggccttctgtgaatatgatgaatcagaacaatcccaacaatccg
ttccggaacactccgcaccttaatagacaatcacagaaaccgccgcatccccgctctggg
ccccgtggaccaatggctccttggactggtccgcgctttccgtgtcatcaacagcagaac
agattcaggcctccaggatttaacgcatgtcggcaaccttatccaccctatcattcaggc
catcagcaatttccgaatgcttcatcagtcggcggcggtcaaactgggctgccaggtcag
ggacagggacctagaccgaaatggaattcaaataagatattcaatcaacagaaccgccaa
aatacagtccaagcccagccacaagcccagaaccaacaaaccaaccagcagcagattcaa
aattcgaataaaaaccaaactccaaaaaaaaagccatggaaaaatcgcctgcaacctgta
ggcaaagttcagaatcaaggcggagcgaatcgcgatcccgcacctccaagtaactcgaaa
ccatcttag
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