KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5451
Entry
Dmel_CG5451       CDS       T00030                                 
Symbol
Smu1
Name
(RefSeq) Smu1 spliceosomal factor, isoform B
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG5451 (Smu1)
Spliceosome [BR:dme03041]
 Complex B
  Other components
   Complex B specific factors
    Dmel_CG5451 (Smu1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st LisH_TPL WDR90_beta-prop_4th Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Mala_s_1-like LisH_WDR26 VPS8_N WDR54 zf_topless TolB_like Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 42272
NCBI-ProteinID: NP_001247189
FlyBase: FBgn0038666
UniProt: Q9VE18
LinkDB
Position
3R
AA seq 509 aa
MSIEIESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVL
KVTQSLKLPDKKLLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENM
LQRAYFDPREAYAEGSSKEKRRTVIAQELSGEVHVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEV
WNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLR
KFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPD
GHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVI
MNMQGQIVRSFSSGKREGGAFISATLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHE
KDVIGLTHHPHQNLLASYSEDGLLKLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtccatagaaatcgaatcagcggatgtgattcggctcatccagcagtatctgaaggag
tccaaccttatgaagaccctgcaaacgttacaggaggaaacgggtgtctccctgaatacg
gtggacagcgtggatggctttgtgcaggatatctccaacgggcactgggacaccgtgcta
aaagtgacccagtctctcaaattaccggataagaagctgctcaatctatacgagcaaata
gtcttggagctgatcgagctcagagaactgggcgcagcaagatctctgctccgccagacg
gatcccatgaccatgttgaagcagcaggagcccgaacgatacatccatttggaaaacatg
ctgcagcgcgcttacttcgatcccagggaagcctatgcagagggaagtagcaaggaaaag
cggcgcacggtcattgcccaagagctaagtggcgaggtgcatgtggtgccctcctccagg
ctcttggcactcctgggacaggctcttaaatggcaacagcaccagggactccttccgccc
ggcaccaccattgatttgttccgcggcaaggcggcgatgaaggaccaggaagaagaaatg
tatcccacccagctgttccgacaaatcaaatttggccaaaagtcgcacgttgagtgcgct
cagttctcgccggatggtcagtatctgataacgggcagtgtggacggtttccttgaggtg
tggaactttaccaccggcaaggtgagaaaggatctgaagtaccaggcgcaggaccagttc
atgatgatggaacaggcggtgctggcgttgaacttctcacgagattccgagatggtggca
tcgggcgcacaggatggccaaatcaaggtgtggcgcatcatcaccggtcagtgtttgcgt
aaattcgagaaagcccacaccaagggaataacctgtctgcagttctcgcgagataacagc
caggtactcagcgcatccttcgactacacggtgagactgcacgggctgaagtcgggaaag
atgctgaaggagttcaaggggcattcctcctttgtgaacgaagccacctttacgcctgac
ggacacagcgtgctcagcgcatcttccgacggcacagtaaaggtttggtcccttaaaacg
accgagtgcgtggccacgtacaagccccttggcaacgagttggccgtaaacacagtcctc
attctgcccaagaatcccgaacacttcattgtctgcaacagatccaatacggttgtcatt
atgaacatgcagggccagattgtgcgatccttctcgtcgggtaagcgcgagggcggtgcc
tttatctcagccactctttcgccgcgaggagagttcatatactgcgctggagaggatcag
gtgctttactgtttctccgtctcctccggtaaacttgaacgtactttgaacgttcatgaa
aaggacgtcattggcctgacacatcatccgcatcaaaatctactggccagctacagtgag
gacggcctgctgaagctttggaagccttag

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