KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5632
Entry
Dmel_CG5632       CDS       T00030                                 
Symbol
thoc6
Name
(RefSeq) thoc6, isoform B
  KO
K13175  THO complex subunit 6
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG5632 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG5632 (thoc6)
   03041 Spliceosome [BR:dme03041]
    Dmel_CG5632 (thoc6)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Dmel_CG5632 (thoc6)
Spliceosome [BR:dme03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dmel_CG5632 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 NBCH_WD40 WD40_CDC20-Fz Beta-prop_IP5PC_F Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_TEP1_C Herpes_UL92
Other DBs
NCBI-GeneID: 39394
NCBI-ProteinID: NP_001261750
FlyBase: FBgn0036263
UniProt: Q9VTV1 M9PEZ4
LinkDB
Position
3L
AA seq 350 aa
MKQKDLKRAYNNVLAQAISGSKQYLFAGNLFGDIFVLRIKELDKGSEEPPGKLKIFPQGS
DVDINYLAFHRDFLIVGAVGLIYGLEWNEEEESLATKRSWEVKIPMQVDAVEVPDVNSMW
LDSENSILFAGCGDGVIYQVSLEDGRIQREYRGHTDYVHSVVGNANGQIFSGAEDGTVRV
WSTKQQQHTSMLEPYKNPNLLRPDWGKWIGAVAVNEDWLLCGGGPKASIFHLRSMESTCV
FSFPGRVHLCDFVDDCVLIGGEHNHVQSYTLNGVLQANIPVEHTACYSAVWQTSPIKFIS
IAGFSNKLHILKDFRFLDSKIEMYGNVEGEENDPEEEDELIEKPLTVEAA
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaacaaaaggatctgaaacgcgcttacaacaatgtcctagcacaggctatatccggc
tctaaacagtacctatttgcgggaaatctctttggcgacattttcgtacttagaataaaa
gaactggacaagggttccgaggagccacctggcaaactgaagatcttcccgcagggcagc
gatgtggacatcaattacctggccttccatcgcgatttcttgatagttggtgcagtgggt
cttatttacggattggaatggaacgaggaggaggaatctctggccaccaaacggtcctgg
gaggtaaagatacccatgcaagtggatgccgtcgaagtgccggatgtgaactccatgtgg
ctggactcggaaaatagcatcctgtttgctggctgtggcgacggagtgatctaccaagtg
agtttggaggacggacgaattcagcgcgagtaccgcggacacacagactacgtgcacagt
gtggtgggcaatgccaacggacagatcttctctggcgccgaggatggcactgtgcgagtg
tggagcaccaagcagcagcagcacacttcaatgctggagccttacaagaacccaaatctg
ttacgtccggattggggcaaatggataggagcagtggctgtcaacgaggattggctgctc
tgcggtggtggacccaaagcttcaattttccacctgcgttccatggaaagcacatgtgtc
tttagcttccccggacgcgtgcatctatgtgactttgtggacgattgtgtcttaatcggt
ggagagcacaatcatgtgcaatcctacactctaaatggagtactgcaagccaatattccc
gtggagcacactgcctgctactctgctgtttggcaaacatcgcccattaaattcatttcc
attgctggtttcagcaacaagttgcatatcctcaaggattttcgcttcctcgacagcaag
attgagatgtatgggaatgtggagggcgaggaaaacgacccagaagaagaagacgaactt
attgaaaaacctctgacagttgaggcggcataa

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