KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5970
Entry
Dmel_CG5970       CDS       T00030                                 
Symbol
cbc
Name
(RefSeq) crowded by cid
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dmel_CG5970 (cbc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG5970 (cbc)
Enzymes [BR:dme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     Dmel_CG5970 (cbc)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     Dmel_CG5970 (cbc)
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N MMR_HSR1 AAA_22 ATP_bind_1 AAA_18 TniB CbiA nSTAND3 AAA_16
Other DBs
NCBI-GeneID: 36494
NCBI-ProteinID: NP_610876
FlyBase: FBgn0033842
UniProt: Q7K284
LinkDB
Position
2R
AA seq 423 aa
MSEDQGKDYTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAI
FTYQGCVLHVSGKMDVCYISKETPMVQYVNCHAALEQFRMEAEEKDRYGPVAMVVGPMDV
GKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFAKTAPLV
YHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHA
AKAYGACAIFVLDQERLYNELLRDVPKGVHVVLLPKSGGVVERSKELRHEARDQRIKEYF
YGNTRAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHH
VLALSFAESVEDDVIGTNVAGFCCVTEVDMERQAVMLLSPQPRPLPPNALLLWSELQFMD
NHT
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtcggaggaccaaggcaaagactacacactggagtccgactccgagctgcgctttgaa
atcgagcagaaggatgccaaagtgctggtgtccctggtcagtggatttgcggagctgttc
ggcacggagctggtgaagaaaaagcagtacgagttcggcgtgggcgccaaggtggccatc
ttcacgtaccagggctgtgtactccacgtctccggcaaaatggacgtgtgctacatctcc
aaggagacgccaatggtgcagtacgtcaactgtcatgcggcactggagcagttccgcatg
gaggccgaggagaaggatcgctacggaccagtggccatggtcgtcggtcccatggacgtg
ggcaagagcactctgtgccgcatcctgcttaactatgctgtgcgcgtgggtcgtcgaccg
ctgtacgccgacctggatgttggacagggctcgattgccatttccgggagtgtggccacc
attctcatcgagcgaccggcgaacgttgaggagggattcgccaagacagcgccgctggtc
tatcactttggccataagtctcccagcggaaacagcgtgctgtacaatgccgtggtttcc
aaaatggcagaggtaacactgcaatctctgaatagcaacaagcgaacaaaaagctctggc
attattataaacacttgtggctgggtaaagggatccggctacgcgcacctgttgcacgcg
gccaaagcctatggagcctgtgccatctttgttctggaccaggagcgactatacaacgag
ctgcttcgagatgttcccaagggagttcatgtggtactgctgcccaagagcggcggcgtc
gtcgagcgcagcaaggaactgcgacacgaggcgagggatcagcgcatcaaggagtacttc
tacggcaatacaagggcgcccttctatccgttcagcttcgaggtgaagttccaggacctg
cgactctacaagatcggcgcaccgccgctgcccgactcctgcatgccaattggaatgaag
gcggaggacaacaagaccaaggtggtggcggttacacccacgcccgccctaatccatcat
gtgctggccctcagctttgccgagtccgtggaggacgatgtgattggcaccaatgtggcc
ggcttttgttgcgtaaccgaagtggatatggaaagacaggcagtgatgttgctttcgccg
cagccgcgacctttgcccccgaacgccctgctcctgtggtcggaactgcagttcatggat
aatcatacctag

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