Drosophila melanogaster (fruit fly): Dmel_CG6258
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Entry
Dmel_CG6258 CDS
T00030
Symbol
RfC38
Name
(RefSeq) replication factor C 38kD subunit, isoform B
KO
K10756
replication factor C subunit 3/5
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03030
DNA replication
dme03410
Base excision repair
dme03420
Nucleotide excision repair
dme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dmel_CG6258 (RfC38)
03410 Base excision repair
Dmel_CG6258 (RfC38)
03420 Nucleotide excision repair
Dmel_CG6258 (RfC38)
03430 Mismatch repair
Dmel_CG6258 (RfC38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dme03032
]
Dmel_CG6258 (RfC38)
03036 Chromosome and associated proteins [BR:
dme03036
]
Dmel_CG6258 (RfC38)
03400 DNA repair and recombination proteins [BR:
dme03400
]
Dmel_CG6258 (RfC38)
DNA replication proteins [BR:
dme03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Dmel_CG6258 (RfC38)
DNA Replication Termination Factors
ELG1-RFC complex
Dmel_CG6258 (RfC38)
Chromosome and associated proteins [BR:
dme03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Dmel_CG6258 (RfC38)
DNA repair and recombination proteins [BR:
dme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Dmel_CG6258 (RfC38)
Check point factors
HRAD17(Rad24)-RFC complex
Dmel_CG6258 (RfC38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
Rep_fac_C
AAA
AAA_11
AAA_22
Hda_lid
ABC_tran
Motif
Other DBs
NCBI-GeneID:
34550
NCBI-ProteinID:
NP_001285833
FlyBase:
FBgn0028700
UniProt:
Q9U9Q1
LinkDB
All DBs
Position
2L
Genome browser
AA seq
356 aa
AA seq
DB search
MALWVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMY
GSGVERLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQ
IEISGQREFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCL
GIRVAAPNETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPF
TANQEIPDLDWQVFLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLV
NNCDMSIKAKTLEFATEYEHRMQSGAKHIFHLEAFVAQFMNIYKKFLSELDMTDDF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcactttgggtggataaataccgtccgcgggagctgtccaaattggacttccacaag
gatcaagcggagaacctacgcaacctttgcaagcagagcgattttcctcatctgatgttc
tacggaccctcgggtgctggcaagaagacacgcatcatgtgcctgctacgggagatgtac
ggatccggcgttgagcggttgaggagcgagaccatgacattcaccacgccatccaatcgg
aaggtagaggtgatgacggtcagcagcaactaccacttggaggtgaatccctccgacgct
ggcatgtacgaccgcacggtggtgatcgatctcatcaagcaggtggcccagacgcatcaa
attgagattagtggccaacgggaattcaaggtgattgtaatttcggagggcgacgaactc
accaaggatgcccagcacgccctgcgccgtacgatggagaaatatgtggccacgtgccgg
ataatcatatcggtgaactccacatctcggatcattccggccatacggtcgcgttgcctg
ggcatacgggtggcggctcccaacgaaacggagatcgtgtccatcttgcagaacacttgc
aagcgggagggactcgcactgcccgtggagctggccaaacgggttgtggacaagtcggag
cgcaatctcaggcgagcacttttgatgctggaggccgccaaggtggccaaggcgccgttt
accgccaatcaggagattcccgacctggactggcaggtgttcctgcgtgagacagcatct
cagattatcagtgagcaaacgcctgccaaactggagaagatccgcgaacgcctgtacgag
ctactcacgcaaggcgttccacctaatctcatattccgcggcctggtcgaacagctggtt
aacaattgtgatatgtccatcaaggcaaagacgctcgagttcgccaccgagtacgagcac
cggatgcagtccggcgccaagcacatttttcatcttgaagcgttcgtcgctcagtttatg
aacatctataaaaagttcctttctgagctggacatgacggatgatttttaa
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integrated database retrieval system
