KEGG   Drosophila melanogaster (fruit fly): Dmel_CG6773
Entry
Dmel_CG6773       CDS       T00030                                 
Symbol
Sec13
Name
(RefSeq) secretory 13, isoform B
  KO
K14004  protein transport protein SEC13
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
dme04141  Protein processing in endoplasmic reticulum
dme04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG6773 (Sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Dmel_CG6773 (Sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    Dmel_CG6773 (Sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG6773 (Sec13)
   04131 Membrane trafficking [BR:dme04131]
    Dmel_CG6773 (Sec13)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Dmel_CG6773 (Sec13)
Membrane trafficking [BR:dme04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    Dmel_CG6773 (Sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    Dmel_CG6773 (Sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    Dmel_CG6773 (Sec13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_HPS5 NBCH_WD40 Ge1_WD40
Other DBs
NCBI-GeneID: 44437
NCBI-ProteinID: NP_001287480
FlyBase: FBgn0024509
UniProt: Q9V3J4
LinkDB
Position
3R
AA seq 356 aa
MVSLLQEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNNKALAELKGHQGPVW
QVAWAHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVL
ACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQRVTSRSAAV
KRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHV
IVWSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQWIRIN
YESGTAIQSKQPSHLPHSHSQQQQALQQHQQQAPSHPGPSSDSEHSSNLSNSQLSN
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggtgagcctgctgcaagagatcgacaccgagcacgaggacatggtccaccacgcagcg
ctggacttctacggcctactgttggccacctgctcctcggacggcagcgtccgcatcttt
cactcgcgcaaaaacaataaggcgctcgccgagctcaagggacaccagggaccagtgtgg
caggtggcctgggcacatcccaagtttggcaacatactggcatcgtgctcctacgaccgc
aaggtgatcgtctggaagtccacaacgccccgggattggactaagctctacgaatacagc
aaccacgactcctcggtaaactcggtggacttcgcgccatccgagtacggattggtgttg
gcctgcgccagttcggatggctcggtatcggtgctcacctgcaacacggagtacggtgtg
tgggatgccaagaagataccgaatgcgcacacgatcggagtgaatgccatctcgtggtgc
cccgcccaggcaccagatccagcatttgaccagcgcgtaacttcgcgttcggcggccgta
aagcgcctagtgagcggtggttgcgataatttagtgaagatttggcgggaggacaacgac
cgctgggtggaggagcaccgactggaggcgcactcggattgggtgcgcgacgtggcctgg
gcgccgtcgatcggattgccccgctcgcagattgccacggcttcgcaggatcgccatgtg
attgtgtggagcagcaacgcagatctatccgagtggacctcgactgtgctgcacacattc
gacgatgccgtgtggagcatctcgtggtcaaccaccggcaacattcttgccgtcaccggt
ggggacaacaatgtcacattgtggaaggagaacacggagggccaatggatccgcatcaac
tacgagtcgggtacggccatccagtcgaagcagccctcgcaccttccgcattcccactcc
cagcagcagcaggcgctacaacagcaccaacaacaggcgccatcgcatccaggtccttcc
tccgattcggagcatagctcgaacctgtccaactcgcagctctccaactga

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