KEGG   Drosophila melanogaster (fruit fly): Dmel_CG7146
Entry
Dmel_CG7146       CDS       T00030                                 
Symbol
Vps39
Name
(RefSeq) vacuolar protein sorting 39
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme04140  Autophagy - animal
dme04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dme00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    Dmel_CG7146 (Vps39)
   04148 Efferocytosis
    Dmel_CG7146 (Vps39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dme04131]
    Dmel_CG7146 (Vps39)
Membrane trafficking [BR:dme04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    Dmel_CG7146 (Vps39)
SSDB
Motif
Pfam: Vps39_1 Vps39_2 CNH Clathrin zf-C2H2_6 WD40_like
Other DBs
NCBI-GeneID: 42192
NCBI-ProteinID: NP_650702
FlyBase: FBgn0038593
UniProt: Q9VEA2
LinkDB
Position
3R
AA seq 876 aa
MHQAYSVHSILKQGVQIESIAAYGNHVILGTRSGQLIMYSVDEETGVDMRMFNKNFSRKP
ITQMEVIASENLLFVLTDLQVQVCDIRRIESNFAFMHSAPDTKGCTLFTMDVDTPKSTTG
RVATVIRVCCAIRRRLVFFFWKEDKLNSLELIIELSDVPRTLCWVGHAVCVGFKDEYVVY
DISGKAPKKHNLFLTSSSISRDPCICLIRNNMLGISKDSYLVVVDPSQYKESDGINNSTD
VRPAAMDSNSSLTPLLWSSPLLDLVWDEPFAVGRVNNAIEVRSLVGKDTLVQTIPELQKT
KFLVHADKGTIFAAATSELWCIRMVEIPIQRQQLLQQKKFQLAIELTQISDEPAADRAQT
IRQIHMLYAKELFTNKEFSAAMKEFEKAAIDPYDVIRLFPNLVPEPKPGTEDVTVPTSST
PALEDSDLENAYLALIEYLAWARQREVVKLRDTKSSSKSLLEIIDTTLLKCYLQTNDSLV
APLLRLNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKLLREQASIEGSVLQGRKR
TIRYLQELGGDHLPLIFEFADWVLNDNPEEGLTIFTDELIEVESLPRAKVLDFFISKHKA
LVIPYLEHVITEWKDGNTLLHNVLLKQYREKVQRLLAQQEKGEEVPELIPMRAKLYKMLE
ESNDYSPDRLLEEFPTNILLEERALILGRLKKHDNVLSIYIHVLGDVAKATAYAEAHYKE
DKHIFHTLIKCILIPPTQPLYDGVPLHPDFSQVNREVALEILNTHATRIDPFEIFEHLPD
DMPMPQLEKYLEKSIRKMMADKHEMQMMCGFLEAESTRLENALEEQRNISFELNESSVCS
ECKKRFQTQSAFVRYPNGHIVHLSCHDRLARAAAQQ
NT seq 2631 nt   +upstreamnt  +downstreamnt
atgcaccaggcctacagtgttcactcgatcctgaaacagggcgtgcagatagagtcaatt
gcggcatatggcaaccatgtcatcttgggcacccgcagcggacagctgatcatgtactct
gtggacgaggagacgggcgtggacatgcggatgttcaacaagaacttcagccggaaaccg
atcacccaaatggaagtgattgcctcggagaacctgctcttcgtactcaccgacttacag
gtgcaggtgtgcgacattcggcggattgagagcaacttcgctttcatgcacagtgcgccc
gacacgaagggatgcaccctgttcaccatggacgtggacacgccgaagtccacaaccgga
cgtgtggccaccgtcatacgggtgtgctgcgctatccggcggcgtcttgtgttcttcttt
tggaaggaggacaagcttaattccctggaattgatcatcgagctcagcgatgtgcccagg
acactgtgctgggtgggccatgctgtctgcgtgggcttcaaagacgaatatgttgtttac
gatatatcaggaaaagcaccaaagaagcacaacctcttccttacctcctctagtatcagc
agagatccctgcatttgccttatccggaacaacatgttgggcatctctaaggacagctac
ctcgtcgtagtagatccgagtcagtacaaagaatcggatggaatcaataactcaacagat
gtccggccagctgccatggacagcaatagttccctaactcctctgctctggtcaagtccg
cttttagatctggtctgggatgagccattcgctgtgggtcgtgtcaacaacgccatcgag
gtgcgcagcctagtgggcaaggacaccctggtccagaccattcccgagctacagaagacg
aaattcctggttcacgccgacaagggaaccatctttgccgccgccacctccgagctttgg
tgcattcgaatggtggaaatccctatccagcgtcagcagttgctacagcaaaagaaattc
caactggctattgagctgacgcaaatctccgatgaacctgccgcggaccgagcccaaacc
attcgccagatacacatgctctatgcgaaagagctgtttaccaataaggagttctcggcg
gccatgaaggagtttgaaaaggcggctatagatccctacgatgtgataagactgttccca
aacttggtgccagaaccaaagcccggcaccgaagatgtcaccgtgcctacgtccagtact
ccggcgcttgaggatagcgacctggagaacgcctacttggcactgatcgagtatctggca
tgggcccgacagcgggaggtggtcaagctgcgcgacactaaaagtagttcaaagtccctg
ctggagatcatcgatacaacgttgctgaagtgttacctgcagacaaacgactctctggtg
gcaccactgctacgcctaaaccagtgccacttagaggagtcggaaaagacgttgaagaag
cacaacaagatctctgaacttatcatcctctaccagatgaagggcaagcacaaggaggcc
cttaaactgcttcgagagcaggcgagcatcgaaggatctgtgctgcagggtcgcaagcgt
accatacgctatcttcaggagctgggtggtgatcatctgccgctgatctttgagttcgct
gactgggtcttaaacgataatcccgaggaaggcctaaccattttcaccgacgaacttatt
gaagtggaatccctgccgcgcgccaaagttcttgatttttttattagcaagcacaaagca
cttgtcattccctatttggagcacgtaatcactgaatggaaggacggcaacaccctgctc
cacaatgtgctcctcaagcagtatcgcgaaaaggtgcaacggcttcttgctcagcaggaa
aaaggagaggaagttcccgaactcattccgatgcgagccaagctctacaagatgttggag
gagtccaacgactattcgccggatcgcctcctagaggaatttccaaccaatatactcttg
gaggagcgtgccctaatcctgggcaggctcaaaaagcacgacaacgtcctgtccatctat
attcatgttctcggagatgtggccaaggcaacggcctatgcggaagcccattacaaagag
gacaagcacatatttcacacgctcattaagtgcatattaataccaccaactcaaccgctc
tatgatggtgtgcccttgcatccggatttctcgcaagtgaatcgagaggtggccctggaa
atacttaacacccacgccaccagaatcgatccattcgagatcttcgagcaccttcccgat
gacatgcccatgccccagctggagaaatacttggagaaatctatacgtaaaatgatggcc
gacaagcacgagatgcagatgatgtgcggcttcctggaggcagagtccacgcgcctggag
aatgccttggaggagcagcgaaacattagcttcgagttaaacgagtctagtgtgtgttcc
gagtgcaagaagcgttttcaaacccagtccgccttcgtgcgctatccaaatgggcacatc
gtgcacctatcctgccacgatcggctcgccagggcggctgctcagcaataa

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