Drosophila melanogaster (fruit fly): Dmel_CG7292
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Entry
Dmel_CG7292 CDS
T00030
Symbol
Rrp6
Name
(RefSeq) Rrp6, isoform B
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmel_CG7292 (Rrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG7292 (Rrp6)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
Dmel_CG7292 (Rrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
41798
NCBI-ProteinID:
NP_001097795
FlyBase:
FBgn0038269
UniProt:
Q9VFF3
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Position
3R
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AA seq
900 aa
AA seq
DB search
MPRTPKRVHQEAKEESAQADQPPKKSASEDVEAFTNKGFKNAIAATKAANAFPQGTARAL
YLSYPGYARVMEDLTQRVVALIGNVLHSKDIKGDIKKRQPEEQFEMVQECNDVLFERITT
NLDIKGGLRRNTQQVVEAQVDVMSSSTSIEPAVASPQTQGTPKAGSWNRTTGTPQRSMVS
ARLFTAKNIVRPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHP
YEFELLKFQPPEEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHH
SYRTFMGITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQR
DLSLYIVNMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYA
RQDTHFLIYVYGRMTNDLLQQHAEPGLLGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKT
KRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNPI
PPLVRQQLHTLHQIVLKARDQPLVKPILEAHSSTQAALPPSTKDFSSKLYCPHDFSQLEE
IRDDLPTLLKRNSTTGKLEVPNKEEVAKVDPTLAAPAMALFEKQSKPTQEEEQRWAHLRK
ESQTMRMPYKRYLAILPLMVQLKADQLARERSELQKRQLCPAAPTVEQNIKLEAHAIGKE
DDDMYSVPLKEQLKRKHPQANVKTDPEQQPTASKRPRKDENSQTKPPVKIEPVEKVQQAL
GESDDEVVEVPIERQATEPPKPSPAQNNRKQKKNQFQRGFKAKNRGNHPQSSSQQVPQHK
GTGNFDYKNVDFRQFKGGAQRARGTEIKQQIRGKNRPNNRNNKQFNKLFTFSNVRKEGKK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaccccgaaaagagttcaccaggaggccaaagaggaatcggcccaagcagac
cagccgccaaagaaatccgcttcagaagatgttgaggcattcacaaacaaagggttcaag
aatgcaatcgccgccacaaaagccgctaatgctttcccacaaggaacagcccgcgccctt
tacctaagctatccaggctacgcacgtgttatggaagacctgacccaacgggtggtggcg
ctcatcgggaacgtgctgcactccaaggacatcaagggcgacatcaaaaaacgccaaccg
gaagagcagtttgagatggtgcaggagtgcaacgacgtactgttcgagcgcattacgact
aatctagacattaaaggtggtctgcgaagaaatacacaacaggtcgtagaggcccaggtg
gacgtgatgagcagctccacatccatagagcccgcagtagcttccccacaaacccaaggg
actccaaaggcaggcagctggaacagaacgacaggaacaccccaacgcagcatggtttcg
gctcgtctcttcaccgccaagaacatcgttcggccgcagacgcaatttagggagccggtg
gataacagtgcccagaatccgtttgttccaagactcaaggagaaacctaattctcttaaa
ccgctggccctgctgcccgaatacgatgatgccggcaatgtccaatcctatttgcatccc
tacgagtttgagctgcttaagtttcagcctccggaggagcagttccaaaaacaaaagcca
gtgcttccagctctgatggcagaaaccgaactaatggtggttgacacggtggaaaaactg
aagcaggcattggaggaactgagacaagcgccccagatcgccatagatgtggagcaccac
tcgtatcgcaccttcatgggcatcacttgcctggtccagatgtctactcgcagcaaagac
tatatttttgataccctgatcctacgcgatgatatgcatatactaaatttggtactcacc
gatcccaagaagctgaagatactgcacggcgccgatttggatattgagtggcttcagcgg
gacttatcgttgtatatcgtcaacatgttcgacacgcatcgggctgccaaagccttgaat
atggcaaggttatcgttggcatatttgcttaagcactatctggacttggatgtggacaag
agcctgcaactggccgattggcggatgagaccgcttccccagcagctggtggactacgct
cgtcaggatacccactttttgatatacgtttacggacggatgacaaacgatctgctgcag
cagcatgccgaaccaggtctgctgggcagtgtctatcaacagagcacggatgtctgcaag
aagcgttataataagcctcacatcggaccagaatcccatttggatttagtaagaaaaacg
aagcgctctttcgacaaccggcaactgtacgcacttcgcggaatcttcgagtggcgcgat
gcgacggcgcggtcagaggacgagagttacggctatgtgctgcccaatcacatgatgctg
caaatcgctgagagtcttccaagggagatgcagggaatcctcgcctgctgcaatcccatt
ccgccgctggtgcgccaacagctgcacacgcttcaccagattgtcctcaaggcgcgcgat
cagccgctggtcaaaccgatcctggaagcccacagtagtacacaggcagcgttgcctccg
tcgaccaaagactttagcagcaagctctactgtccgcacgatttttcgcaactggaggag
attcgcgacgacctgccaacgctgttgaaacgtaattcaactacaggaaaactggaggtg
cccaataaggaggaggttgccaaagtagatccaaccttagcggcaccagccatggctctg
ttcgaaaagcagtccaagccgacacaagaagaggaacagcgctgggcccatcttcgcaag
gagagccagacaatgcgtatgccctacaaacgctatctcgccatcctacctctgatggtg
cagctgaaggccgatcagttggccagggagcgaagtgagttgcaaaagaggcaattgtgt
ccagcagccccaactgtggagcaaaacattaagctggaggcacacgccatcggaaaggag
gatgatgacatgtactccgtcccgctgaaggaacaactgaagcgcaagcacccacaagcg
aacgtgaaaacagatccggaacagcagccgactgctagcaagcgacctcgcaaggacgag
aattcacaaaccaaaccgccggtaaagatcgaaccagtcgaaaaagttcagcaggcttta
ggcgaaagcgatgatgaggtcgttgaggttcctatcgaaaggcaagccacagagccaccg
aaaccatcaccggcacagaacaaccgcaagcaaaagaaaaatcagttccagcgcggattc
aaggccaagaatcgaggaaaccacccgcagagctccagtcagcaggttccgcagcacaag
ggtacaggcaactttgactacaagaacgtggacttccggcaattcaagggaggagcgcaa
agagcccggggcacagaaatcaagcagcaaattcgcggcaagaaccgtcccaacaatcgg
aacaacaagcagttcaacaagctttttacatttagtaatgtaagaaaagagggcaaaaaa
tga
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